Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Gm44825-201ENSMUST00000207557 150 ntBASIC4.88□□□□□ -1.63
Hoxd3P09027 Gm44598-201ENSMUST00000207566 150 ntBASIC4.88□□□□□ -1.63
Hoxd3P09027 Gm19126-201ENSMUST00000207896 509 ntBASIC4.88□□□□□ -1.63
Hoxd3P09027 AC160123.1-201ENSMUST00000213443 570 ntTSL 5 BASIC4.88□□□□□ -1.63
Hoxd3P09027 2610044O15Rik8-201ENSMUST00000079272 264 ntTSL 5 BASIC4.88□□□□□ -1.63
Hoxd3P09027 Fanci-201ENSMUST00000036865 4645 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Hoxd3P09027 Ubr4-212ENSMUST00000165860 15798 ntTSL 5 BASIC4.88□□□□□ -1.63
Hoxd3P09027 Vmn1r201-203ENSMUST00000226965 4741 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Hoxd3P09027 Gm5890-201ENSMUST00000190145 1336 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Hoxd3P09027 Olfr1115-202ENSMUST00000213513 3604 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Hoxd3P09027 S100pbp-202ENSMUST00000072431 4059 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Hoxd3P09027 Vmn2r14-201ENSMUST00000170341 2547 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Hoxd3P09027 Ppp2r3a-201ENSMUST00000066773 4461 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Hoxd3P09027 Pkn2-210ENSMUST00000174422 2904 ntTSL 5 BASIC4.88□□□□□ -1.63
Hoxd3P09027 Slf1-201ENSMUST00000151524 3747 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Hoxd3P09027 Klra2-201ENSMUST00000032306 1799 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
Hoxd3P09027 Hc-201ENSMUST00000028233 5445 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Hoxd3P09027 Gm10030-203ENSMUST00000197321 3824 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Hoxd3P09027 Gm11290-204ENSMUST00000224688 3042 ntBASIC4.88□□□□□ -1.63
Hoxd3P09027 Tnfrsf26-202ENSMUST00000208124 3062 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Hoxd3P09027 Adgb-205ENSMUST00000179956 5218 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
Hoxd3P09027 Thap6-201ENSMUST00000191860 3151 ntBASIC4.88□□□□□ -1.63
Hoxd3P09027 Kcnj16-205ENSMUST00000178798 3678 ntAPPRIS P1 TSL 3 BASIC4.87□□□□□ -1.63
Hoxd3P09027 Chek1-205ENSMUST00000173963 1509 ntTSL 5 BASIC4.87□□□□□ -1.63
Hoxd3P09027 Xrn1-201ENSMUST00000034981 5499 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
Hoxd3P09027 Gm381-201ENSMUST00000117443 2037 ntBASIC4.87□□□□□ -1.63
Hoxd3P09027 Fam227b-204ENSMUST00000178118 1599 ntAPPRIS P2 TSL 5 BASIC4.87□□□□□ -1.63
Hoxd3P09027 Gm6614-203ENSMUST00000181791 2450 ntAPPRIS P2 TSL 5 BASIC4.87□□□□□ -1.63
Hoxd3P09027 Olfr1015-203ENSMUST00000215945 2479 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Hoxd3P09027 Fgb-201ENSMUST00000048246 3810 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Hoxd3P09027 Gm10309-201ENSMUST00000095186 2005 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Hoxd3P09027 Nusap1-202ENSMUST00000068225 2960 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
Hoxd3P09027 Vmn1r220-204ENSMUST00000227950 6238 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Hoxd3P09027 Crnn-201ENSMUST00000107300 1628 ntAPPRIS P1 TSL 3 BASIC4.87□□□□□ -1.63
Hoxd3P09027 Gm42507-201ENSMUST00000201187 2555 ntBASIC4.87□□□□□ -1.63
Hoxd3P09027 Olfr1381-202ENSMUST00000213256 4954 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Hoxd3P09027 Gm38142-201ENSMUST00000194093 3555 ntBASIC4.87□□□□□ -1.63
Hoxd3P09027 Gm42541-201ENSMUST00000199871 2249 ntBASIC4.87□□□□□ -1.63
Hoxd3P09027 Olfr753-ps1-203ENSMUST00000208970 2764 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Hoxd3P09027 Trbv13-2-201ENSMUST00000103270 340 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Hoxd3P09027 Trav6-6-201ENSMUST00000103584 344 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Hoxd3P09027 Trav14d-3-dv8-201ENSMUST00000103608 456 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Hoxd3P09027 Trav6n-5-201ENSMUST00000103611 338 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Hoxd3P09027 Gm25795-201ENSMUST00000104421 132 ntBASIC4.87□□□□□ -1.63
Hoxd3P09027 Gm9112-201ENSMUST00000113610 420 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
Hoxd3P09027 Gm13876-201ENSMUST00000118451 261 ntBASIC4.87□□□□□ -1.63
Hoxd3P09027 Itpa-ps3-201ENSMUST00000119034 395 ntBASIC4.87□□□□□ -1.63
Hoxd3P09027 Gm12486-201ENSMUST00000120887 541 ntBASIC4.87□□□□□ -1.63
Hoxd3P09027 Gm23463-201ENSMUST00000122468 99 ntBASIC4.87□□□□□ -1.63
Hoxd3P09027 Gm12409-201ENSMUST00000147231 646 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Hoxd3P09027 Gm5699-201ENSMUST00000152491 723 ntBASIC4.87□□□□□ -1.63
Hoxd3P09027 Trav6d-7-201ENSMUST00000178650 358 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Hoxd3P09027 Trav6n-7-201ENSMUST00000179607 358 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Hoxd3P09027 Tmem167-ps3-201ENSMUST00000186718 178 ntBASIC4.87□□□□□ -1.63
Hoxd3P09027 Gm28358-201ENSMUST00000187860 636 ntTSL 5 BASIC4.87□□□□□ -1.63
Hoxd3P09027 Gm29140-201ENSMUST00000190187 476 ntBASIC4.87□□□□□ -1.63
Hoxd3P09027 Gm8939-201ENSMUST00000192577 964 ntBASIC4.87□□□□□ -1.63
Hoxd3P09027 Gm17934-201ENSMUST00000192818 422 ntBASIC4.87□□□□□ -1.63
Hoxd3P09027 Gm7626-201ENSMUST00000195801 353 ntBASIC4.87□□□□□ -1.63
Hoxd3P09027 Il6-202ENSMUST00000195978 651 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Hoxd3P09027 Gm6059-201ENSMUST00000196903 340 ntBASIC4.87□□□□□ -1.63
Hoxd3P09027 Gm6260-202ENSMUST00000197170 921 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Hoxd3P09027 Igkv13-76-201ENSMUST00000197621 347 ntBASIC4.87□□□□□ -1.63
Hoxd3P09027 Trav6d-6-201ENSMUST00000197754 344 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Hoxd3P09027 Gm42865-201ENSMUST00000197981 613 ntTSL 3 BASIC4.87□□□□□ -1.63
Hoxd3P09027 Gm45127-201ENSMUST00000205984 1015 ntBASIC4.87□□□□□ -1.63
Hoxd3P09027 Gm38574-201ENSMUST00000211855 640 ntBASIC4.87□□□□□ -1.63
Hoxd3P09027 AC123944.2-201ENSMUST00000215290 382 ntBASIC4.87□□□□□ -1.63
Hoxd3P09027 Gm46993-201ENSMUST00000220708 259 ntBASIC4.87□□□□□ -1.63
Hoxd3P09027 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC4.87□□□□□ -1.63
Hoxd3P09027 AC165092.2-201ENSMUST00000224681 368 ntBASIC4.87□□□□□ -1.63
Hoxd3P09027 Gm22828-201ENSMUST00000083768 107 ntBASIC4.87□□□□□ -1.63
Hoxd3P09027 Azin1-201ENSMUST00000065308 4871 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Hoxd3P09027 Eps15-207ENSMUST00000175776 2802 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
Hoxd3P09027 Serpina7-201ENSMUST00000033626 2330 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Hoxd3P09027 Klf7-202ENSMUST00000114086 7662 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Hoxd3P09027 9230109A22Rik-202ENSMUST00000228644 1853 ntBASIC4.87□□□□□ -1.63
Hoxd3P09027 Gm40518-202ENSMUST00000214538 4080 ntTSL 5 BASIC4.87□□□□□ -1.63
Hoxd3P09027 Gm16568-201ENSMUST00000066038 1910 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Hoxd3P09027 Gm37864-201ENSMUST00000195308 3075 ntBASIC4.87□□□□□ -1.63
Hoxd3P09027 Gm42494-201ENSMUST00000196515 3051 ntBASIC4.87□□□□□ -1.63
Hoxd3P09027 Vmn1r176-203ENSMUST00000226767 2536 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Hoxd3P09027 Vmn1r176-205ENSMUST00000227661 2507 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Hoxd3P09027 Vmn1r176-206ENSMUST00000228280 2532 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Hoxd3P09027 Ptprd-213ENSMUST00000173376 4793 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Hoxd3P09027 Gm14496-201ENSMUST00000071760 2550 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Hoxd3P09027 Zfp449-201ENSMUST00000101560 3738 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Hoxd3P09027 2610001J05Rik-201ENSMUST00000139231 3177 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Hoxd3P09027 Zfp26-203ENSMUST00000159569 11276 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Hoxd3P09027 Spag17os-202ENSMUST00000145279 3219 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Hoxd3P09027 Gm12794-201ENSMUST00000052027 1452 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Hoxd3P09027 AC116950.1-201ENSMUST00000226322 3250 ntBASIC4.87□□□□□ -1.63
Hoxd3P09027 Olfr259-202ENSMUST00000213978 4046 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Hoxd3P09027 Fap-201ENSMUST00000000402 2187 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
Hoxd3P09027 Trps1-207ENSMUST00000184885 3492 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Hoxd3P09027 Csde1-214ENSMUST00000199240 3457 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Hoxd3P09027 Dcun1d4-202ENSMUST00000087181 4117 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Hoxd3P09027 Trim16-203ENSMUST00000108703 3574 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Hoxd3P09027 AC130217.2-201ENSMUST00000224009 2990 ntBASIC4.86□□□□□ -1.63
Hoxd3P09027 Vmn2r96-201ENSMUST00000165692 2343 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 74.7 ms