Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Setd2-201ENSMUST00000153838 8350 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Trim39Q9ESN2 Gm44113-201ENSMUST00000203510 3041 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Trim39Q9ESN2 Vmn2r115-201ENSMUST00000168175 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Trim39Q9ESN2 Gm44735-201ENSMUST00000206197 1752 ntBASIC5.47□□□□□ -1.53
Trim39Q9ESN2 Gm35940-201ENSMUST00000213355 4797 ntTSL 5 BASIC5.47□□□□□ -1.53
Trim39Q9ESN2 Smad2-203ENSMUST00000113930 1305 ntTSL 5 BASIC5.47□□□□□ -1.53
Trim39Q9ESN2 Gm45483-201ENSMUST00000209845 1682 ntBASIC5.47□□□□□ -1.53
Trim39Q9ESN2 Gm26984-201ENSMUST00000182345 3510 ntBASIC5.47□□□□□ -1.53
Trim39Q9ESN2 Qser1-201ENSMUST00000117237 8973 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Trim39Q9ESN2 Usp26-202ENSMUST00000114869 4133 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
Trim39Q9ESN2 Sis-201ENSMUST00000094190 5887 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.53
Trim39Q9ESN2 Slc22a30-202ENSMUST00000096269 2255 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
Trim39Q9ESN2 Gm37551-201ENSMUST00000195556 2861 ntBASIC5.46□□□□□ -1.53
Trim39Q9ESN2 9830004L10Rik-201ENSMUST00000185548 2177 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
Trim39Q9ESN2 Tnfrsf26-201ENSMUST00000055723 3107 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
Trim39Q9ESN2 Ptprq-201ENSMUST00000050702 7393 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.53
Trim39Q9ESN2 Wdr49-201ENSMUST00000193989 2413 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.53
Trim39Q9ESN2 Olfr1170-202ENSMUST00000214386 3355 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.53
Trim39Q9ESN2 AC123705.3-201ENSMUST00000223531 2069 ntBASIC5.46□□□□□ -1.53
Trim39Q9ESN2 Vmn1r202-202ENSMUST00000228020 5441 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Trim39Q9ESN2 Lrrn3-201ENSMUST00000043884 3865 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Trim39Q9ESN2 Dazl-201ENSMUST00000010736 2942 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Trim39Q9ESN2 8430419K02Rik-201ENSMUST00000128654 1870 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Trim39Q9ESN2 Ighv8-12-201ENSMUST00000103540 315 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Trim39Q9ESN2 Gm12255-201ENSMUST00000117184 284 ntBASIC5.46□□□□□ -1.54
Trim39Q9ESN2 Gm8424-201ENSMUST00000117716 988 ntBASIC5.46□□□□□ -1.54
Trim39Q9ESN2 Olfr404-ps1-201ENSMUST00000121065 972 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Trim39Q9ESN2 Gm15696-201ENSMUST00000121730 445 ntBASIC5.46□□□□□ -1.54
Trim39Q9ESN2 Hmgb4os-201ENSMUST00000131581 518 ntTSL 5 BASIC5.46□□□□□ -1.54
Trim39Q9ESN2 Gm14271-201ENSMUST00000137886 630 ntTSL 3 BASIC5.46□□□□□ -1.54
Trim39Q9ESN2 Gm11507-201ENSMUST00000156462 412 ntBASIC5.46□□□□□ -1.54
Trim39Q9ESN2 Ear10-201ENSMUST00000159175 678 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Trim39Q9ESN2 Snrpe-203ENSMUST00000166291 360 ntTSL 3 BASIC5.46□□□□□ -1.54
Trim39Q9ESN2 Gm7008-203ENSMUST00000171356 476 ntTSL 2 BASIC5.46□□□□□ -1.54
Trim39Q9ESN2 Gm24081-201ENSMUST00000175177 125 ntBASIC5.46□□□□□ -1.54
Trim39Q9ESN2 Gm18006-201ENSMUST00000177411 662 ntBASIC5.46□□□□□ -1.54
Trim39Q9ESN2 Gm5430-201ENSMUST00000182525 915 ntBASIC5.46□□□□□ -1.54
Trim39Q9ESN2 Gm29519-201ENSMUST00000186994 398 ntBASIC5.46□□□□□ -1.54
Trim39Q9ESN2 Gml2-203ENSMUST00000188180 649 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
Trim39Q9ESN2 Vmn2r-ps149-201ENSMUST00000188423 590 ntBASIC5.46□□□□□ -1.54
Trim39Q9ESN2 1700108F19Rik-207ENSMUST00000191384 210 ntTSL 3 BASIC5.46□□□□□ -1.54
Trim39Q9ESN2 7420461P10Rik-203ENSMUST00000193898 545 ntAPPRIS ALT2 TSL 3 BASIC5.46□□□□□ -1.54
Trim39Q9ESN2 Snurf-201ENSMUST00000194059 216 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
Trim39Q9ESN2 Gm5318-201ENSMUST00000205249 406 ntBASIC5.46□□□□□ -1.54
Trim39Q9ESN2 Gm28710-202ENSMUST00000211738 2987 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Trim39Q9ESN2 Olfr1114-ps1-201ENSMUST00000213896 456 ntBASIC5.46□□□□□ -1.54
Trim39Q9ESN2 1700030L22Rik-201ENSMUST00000221214 567 ntTSL 5 BASIC5.46□□□□□ -1.54
Trim39Q9ESN2 AC165092.3-201ENSMUST00000223602 282 ntBASIC5.46□□□□□ -1.54
Trim39Q9ESN2 AC117656.1-201ENSMUST00000225826 339 ntBASIC5.46□□□□□ -1.54
Trim39Q9ESN2 4930515G13Rik-201ENSMUST00000057521 492 ntBASIC5.46□□□□□ -1.54
Trim39Q9ESN2 Olfr235-206ENSMUST00000215407 2633 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Trim39Q9ESN2 Lama2-207ENSMUST00000189575 4244 ntTSL 5 BASIC5.46□□□□□ -1.54
Trim39Q9ESN2 Olfr629-203ENSMUST00000216300 2277 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Trim39Q9ESN2 Ccdc110-201ENSMUST00000095326 2656 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Trim39Q9ESN2 Trps1-203ENSMUST00000183421 3446 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Trim39Q9ESN2 Gm44209-201ENSMUST00000204556 4153 ntBASIC5.46□□□□□ -1.54
Trim39Q9ESN2 Gm10324-201ENSMUST00000092528 1815 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Trim39Q9ESN2 Gm5796-201ENSMUST00000096184 1817 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Trim39Q9ESN2 Gm43793-201ENSMUST00000201645 1333 ntBASIC5.46□□□□□ -1.54
Trim39Q9ESN2 Smc2-202ENSMUST00000117280 5328 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Trim39Q9ESN2 Il31ra-201ENSMUST00000051756 3680 ntAPPRIS P2 TSL 1 (best) BASIC5.45□□□□□ -1.54
Trim39Q9ESN2 AC123858.1-201ENSMUST00000226948 1874 ntBASIC5.45□□□□□ -1.54
Trim39Q9ESN2 AC110043.1-201ENSMUST00000220278 1627 ntBASIC5.45□□□□□ -1.54
Trim39Q9ESN2 AC124569.3-201ENSMUST00000224860 1621 ntBASIC5.45□□□□□ -1.54
Trim39Q9ESN2 Rbpj-202ENSMUST00000087360 5252 ntTSL 5 BASIC5.45□□□□□ -1.54
Trim39Q9ESN2 Gm38335-201ENSMUST00000195727 1789 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Trim39Q9ESN2 Vmn2r107-201ENSMUST00000042090 2586 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Trim39Q9ESN2 Olfr1389-203ENSMUST00000217595 3549 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Trim39Q9ESN2 Pramef25-201ENSMUST00000105766 1684 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Trim39Q9ESN2 Scgb1b24-201ENSMUST00000108087 279 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Trim39Q9ESN2 Gm14744-201ENSMUST00000114039 800 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Trim39Q9ESN2 Gm13428-201ENSMUST00000117540 365 ntBASIC5.45□□□□□ -1.54
Trim39Q9ESN2 Gm13880-201ENSMUST00000118421 474 ntBASIC5.45□□□□□ -1.54
Trim39Q9ESN2 Gm6584-201ENSMUST00000119671 447 ntBASIC5.45□□□□□ -1.54
Trim39Q9ESN2 Gm14695-201ENSMUST00000121721 282 ntBASIC5.45□□□□□ -1.54
Trim39Q9ESN2 Gm13373-201ENSMUST00000144634 655 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Trim39Q9ESN2 Gm15471-201ENSMUST00000145893 625 ntTSL 2 BASIC5.45□□□□□ -1.54
Trim39Q9ESN2 Gm16079-201ENSMUST00000149065 578 ntTSL 3 BASIC5.45□□□□□ -1.54
Trim39Q9ESN2 Gm26102-201ENSMUST00000157251 284 ntBASIC5.45□□□□□ -1.54
Trim39Q9ESN2 Scarletltr-201ENSMUST00000176950 305 ntTSL 5 BASIC5.45□□□□□ -1.54
Trim39Q9ESN2 Gm20830-201ENSMUST00000178016 684 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Trim39Q9ESN2 5730522E02Rik-208ENSMUST00000179180 450 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
Trim39Q9ESN2 Gm20812-201ENSMUST00000179220 684 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Trim39Q9ESN2 n-R5s209-201ENSMUST00000179494 119 ntBASIC5.45□□□□□ -1.54
Trim39Q9ESN2 Gm27024-201ENSMUST00000182561 755 ntBASIC5.45□□□□□ -1.54
Trim39Q9ESN2 Gm3434-202ENSMUST00000184421 521 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Trim39Q9ESN2 Gm28179-202ENSMUST00000189029 327 ntTSL 5 BASIC5.45□□□□□ -1.54
Trim39Q9ESN2 Gm6693-201ENSMUST00000189583 813 ntBASIC5.45□□□□□ -1.54
Trim39Q9ESN2 Gm28532-201ENSMUST00000190408 572 ntTSL 5 BASIC5.45□□□□□ -1.54
Trim39Q9ESN2 Topbp1-ps2-201ENSMUST00000191289 189 ntBASIC5.45□□□□□ -1.54
Trim39Q9ESN2 Ighv5-3-201ENSMUST00000195336 322 ntBASIC5.45□□□□□ -1.54
Trim39Q9ESN2 Gm19418-201ENSMUST00000197436 580 ntBASIC5.45□□□□□ -1.54
Trim39Q9ESN2 Gm44108-201ENSMUST00000203525 422 ntBASIC5.45□□□□□ -1.54
Trim39Q9ESN2 Gm43994-201ENSMUST00000203809 227 ntTSL 5 BASIC5.45□□□□□ -1.54
Trim39Q9ESN2 Gm8039-201ENSMUST00000204758 712 ntBASIC5.45□□□□□ -1.54
Trim39Q9ESN2 Gm44169-201ENSMUST00000205133 359 ntTSL 2 BASIC5.45□□□□□ -1.54
Trim39Q9ESN2 Gm45004-201ENSMUST00000205302 465 ntTSL 2 BASIC5.45□□□□□ -1.54
Trim39Q9ESN2 Olfr1341-201ENSMUST00000061215 939 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Trim39Q9ESN2 Olfr1458-201ENSMUST00000076729 906 ntAPPRIS ALT2 BASIC5.45□□□□□ -1.54
Trim39Q9ESN2 Gm10038-201ENSMUST00000077233 441 ntBASIC5.45□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 67.5 ms