Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Fbxw14-203ENSMUST00000198844 1786 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
Col6a3E9PWQ3 Snora36b-201ENSMUST00000104383 132 ntBASIC3.49□□□□□ -1.85
Col6a3E9PWQ3 Gm23803-201ENSMUST00000104610 132 ntBASIC3.49□□□□□ -1.85
Col6a3E9PWQ3 Gm15140-201ENSMUST00000112565 984 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
Col6a3E9PWQ3 Gm2892-201ENSMUST00000145537 711 ntBASIC3.49□□□□□ -1.85
Col6a3E9PWQ3 Gm17421-201ENSMUST00000167845 674 ntBASIC3.49□□□□□ -1.85
Col6a3E9PWQ3 Gm26061-201ENSMUST00000175584 108 ntBASIC3.49□□□□□ -1.85
Col6a3E9PWQ3 Gm16794-201ENSMUST00000180727 2100 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
Col6a3E9PWQ3 Gm27188-201ENSMUST00000184383 510 ntTSL 3 BASIC3.49□□□□□ -1.85
Col6a3E9PWQ3 AC120555.1-201ENSMUST00000221020 222 ntTSL 5 BASIC3.49□□□□□ -1.85
Col6a3E9PWQ3 Senp8-201ENSMUST00000051039 3682 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
Col6a3E9PWQ3 Gm15141-201ENSMUST00000121860 729 ntBASIC3.49□□□□□ -1.85
Col6a3E9PWQ3 Gm25808-201ENSMUST00000122784 284 ntBASIC3.49□□□□□ -1.85
Col6a3E9PWQ3 4930421P07Rik-201ENSMUST00000147322 399 ntBASIC3.49□□□□□ -1.85
Col6a3E9PWQ3 Mir3569-201ENSMUST00000185080 58 ntBASIC3.49□□□□□ -1.85
Col6a3E9PWQ3 Gm6510-201ENSMUST00000195916 574 ntBASIC3.49□□□□□ -1.85
Col6a3E9PWQ3 Olfr187-201ENSMUST00000206428 978 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Col6a3E9PWQ3 Gm39147-201ENSMUST00000211376 465 ntBASIC3.49□□□□□ -1.85
Col6a3E9PWQ3 Rs1-201ENSMUST00000033650 5840 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
Col6a3E9PWQ3 Scn11a-202ENSMUST00000215718 5899 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
Col6a3E9PWQ3 Gm13088-201ENSMUST00000105771 1819 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Col6a3E9PWQ3 Ranbp2-201ENSMUST00000003310 9608 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Col6a3E9PWQ3 AC153532.2-201ENSMUST00000219753 3844 ntBASIC3.49□□□□□ -1.85
Col6a3E9PWQ3 Olfr715b-202ENSMUST00000215713 3879 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Col6a3E9PWQ3 Cep112os1-201ENSMUST00000137907 3005 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
Col6a3E9PWQ3 Fbxo48-202ENSMUST00000109635 1098 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
Col6a3E9PWQ3 Gm15094-201ENSMUST00000118394 1131 ntBASIC3.48□□□□□ -1.85
Col6a3E9PWQ3 Gm15103-201ENSMUST00000119893 871 ntBASIC3.48□□□□□ -1.85
Col6a3E9PWQ3 Gm25714-201ENSMUST00000158626 296 ntBASIC3.48□□□□□ -1.85
Col6a3E9PWQ3 Gm16584-201ENSMUST00000159267 189 ntBASIC3.48□□□□□ -1.85
Col6a3E9PWQ3 Mir7026-201ENSMUST00000184384 67 ntBASIC3.48□□□□□ -1.85
Col6a3E9PWQ3 Gm37146-201ENSMUST00000192572 463 ntTSL 3 BASIC3.48□□□□□ -1.85
Col6a3E9PWQ3 Gm17967-201ENSMUST00000195319 647 ntBASIC3.48□□□□□ -1.85
Col6a3E9PWQ3 Gm6303-201ENSMUST00000210123 471 ntBASIC3.48□□□□□ -1.85
Col6a3E9PWQ3 Ms4a2-201ENSMUST00000025583 1211 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Col6a3E9PWQ3 Olfr825-201ENSMUST00000076814 1159 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
Col6a3E9PWQ3 Gm37745-201ENSMUST00000193304 8163 ntBASIC3.48□□□□□ -1.85
Col6a3E9PWQ3 Sspo-206ENSMUST00000212740 15408 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
Col6a3E9PWQ3 Olfr988-203ENSMUST00000215511 1906 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Col6a3E9PWQ3 St8sia4-204ENSMUST00000189556 10027 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Col6a3E9PWQ3 Olfr1019-202ENSMUST00000213515 3031 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Col6a3E9PWQ3 Naip6-201ENSMUST00000042220 6705 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
Col6a3E9PWQ3 Gm37529-201ENSMUST00000195618 4321 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Col6a3E9PWQ3 Olfr1397-ps1-201ENSMUST00000121388 962 ntBASIC3.48□□□□□ -1.85
Col6a3E9PWQ3 Gm13546-201ENSMUST00000135735 401 ntTSL 5 BASIC3.48□□□□□ -1.85
Col6a3E9PWQ3 Gm25113-201ENSMUST00000157185 143 ntBASIC3.48□□□□□ -1.85
Col6a3E9PWQ3 Gm23670-201ENSMUST00000157469 119 ntBASIC3.48□□□□□ -1.85
Col6a3E9PWQ3 Gm28782-201ENSMUST00000185980 414 ntTSL 3 BASIC3.48□□□□□ -1.85
Col6a3E9PWQ3 Gm37701-201ENSMUST00000192947 1100 ntBASIC3.48□□□□□ -1.85
Col6a3E9PWQ3 Gm43600-201ENSMUST00000202134 223 ntBASIC3.48□□□□□ -1.85
Col6a3E9PWQ3 Gm19095-201ENSMUST00000220533 730 ntBASIC3.48□□□□□ -1.85
Col6a3E9PWQ3 Olfr492-201ENSMUST00000079865 945 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
Col6a3E9PWQ3 Vmn1r51-207ENSMUST00000227766 4218 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
Col6a3E9PWQ3 Nbeal1-203ENSMUST00000160834 15731 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Col6a3E9PWQ3 Zfp808-201ENSMUST00000099449 2571 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
Col6a3E9PWQ3 Olfr24-203ENSMUST00000216754 4327 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
Col6a3E9PWQ3 Shroom4-201ENSMUST00000089520 8201 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Col6a3E9PWQ3 Vmn1r90-207ENSMUST00000227692 7101 ntAPPRIS P2 BASIC3.48□□□□□ -1.85
Col6a3E9PWQ3 Olfr591-202ENSMUST00000216581 4802 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Col6a3E9PWQ3 Trp53bp1-201ENSMUST00000110647 9405 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
Col6a3E9PWQ3 Gm14811-201ENSMUST00000117070 117 ntBASIC3.48□□□□□ -1.85
Col6a3E9PWQ3 Gm12578-201ENSMUST00000121244 417 ntBASIC3.48□□□□□ -1.85
Col6a3E9PWQ3 Gm15521-201ENSMUST00000141752 835 ntTSL 2 BASIC3.48□□□□□ -1.85
Col6a3E9PWQ3 Gm25280-201ENSMUST00000157269 101 ntBASIC3.48□□□□□ -1.85
Col6a3E9PWQ3 Vmn1r-ps46-201ENSMUST00000173862 949 ntBASIC3.48□□□□□ -1.85
Col6a3E9PWQ3 Olfr1249-201ENSMUST00000099769 957 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
Col6a3E9PWQ3 Olfr1501-203ENSMUST00000215350 4395 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Col6a3E9PWQ3 Olfr844-202ENSMUST00000220268 1686 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Col6a3E9PWQ3 Olfr1238-203ENSMUST00000217237 5761 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Col6a3E9PWQ3 Zfp97-201ENSMUST00000147630 2684 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
Col6a3E9PWQ3 Zfp473-207ENSMUST00000149011 9230 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Col6a3E9PWQ3 Gm7237-201ENSMUST00000148435 1401 ntTSL 5 BASIC3.47□□□□□ -1.85
Col6a3E9PWQ3 Gm25529-201ENSMUST00000104850 92 ntBASIC3.47□□□□□ -1.85
Col6a3E9PWQ3 Gm13751-201ENSMUST00000120280 752 ntBASIC3.47□□□□□ -1.85
Col6a3E9PWQ3 Vmn1r-ps106-201ENSMUST00000120587 824 ntBASIC3.47□□□□□ -1.85
Col6a3E9PWQ3 Gm33981-201ENSMUST00000219918 660 ntTSL 5 BASIC3.47□□□□□ -1.85
Col6a3E9PWQ3 Cnr1-202ENSMUST00000084736 5761 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
Col6a3E9PWQ3 Angpt1-201ENSMUST00000022921 4260 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
Col6a3E9PWQ3 Gm14443-201ENSMUST00000109054 4516 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Col6a3E9PWQ3 Tmem56-201ENSMUST00000029777 6248 ntAPPRIS P2 TSL 1 (best) BASIC3.47□□□□□ -1.85
Col6a3E9PWQ3 2310057J18Rik-202ENSMUST00000140558 1445 ntTSL 5 BASIC3.47□□□□□ -1.85
Col6a3E9PWQ3 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Col6a3E9PWQ3 Gm22939-201ENSMUST00000103958 131 ntBASIC3.47□□□□□ -1.85
Col6a3E9PWQ3 Catsper4-202ENSMUST00000105878 632 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Col6a3E9PWQ3 Gm12025-201ENSMUST00000117768 144 ntBASIC3.47□□□□□ -1.85
Col6a3E9PWQ3 Gm14581-201ENSMUST00000121726 198 ntBASIC3.47□□□□□ -1.85
Col6a3E9PWQ3 Crxos-205ENSMUST00000171280 571 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Col6a3E9PWQ3 Gm34091-201ENSMUST00000200875 604 ntBASIC3.47□□□□□ -1.85
Col6a3E9PWQ3 Gm42530-201ENSMUST00000202683 550 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Col6a3E9PWQ3 Vmn1r232-201ENSMUST00000077001 1159 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Col6a3E9PWQ3 Eya4-202ENSMUST00000092665 5304 ntAPPRIS P2 TSL 1 (best) BASIC3.47□□□□□ -1.85
Col6a3E9PWQ3 Gm4788-202ENSMUST00000111986 2935 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Col6a3E9PWQ3 Olfr1173-201ENSMUST00000099830 2268 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Col6a3E9PWQ3 Vmn2r-ps36-201ENSMUST00000172589 2562 ntBASIC3.47□□□□□ -1.85
Col6a3E9PWQ3 Esrrg-202ENSMUST00000110938 5373 ntAPPRIS ALT1 TSL 1 (best) BASIC3.47□□□□□ -1.85
Col6a3E9PWQ3 Gm25938-201ENSMUST00000104139 166 ntBASIC3.46□□□□□ -1.85
Col6a3E9PWQ3 Tshb-202ENSMUST00000170856 552 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.85
Col6a3E9PWQ3 Gm6140-201ENSMUST00000192494 966 ntBASIC3.46□□□□□ -1.85
Col6a3E9PWQ3 Gm31415-201ENSMUST00000194963 344 ntTSL 5 BASIC3.46□□□□□ -1.85
Col6a3E9PWQ3 Gm6171-201ENSMUST00000220760 645 ntBASIC3.46□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 91.5 ms