Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PdfS4R2K0 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PdfS4R2K0 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
PdfS4R2K0 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PdfS4R2K0 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PdfS4R2K0 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PdfS4R2K0 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PdfS4R2K0 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC13.38□□□□□ -0.27
PdfS4R2K0 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PdfS4R2K0 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
PdfS4R2K0 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PdfS4R2K0 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PdfS4R2K0 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PdfS4R2K0 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PdfS4R2K0 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PdfS4R2K0 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
PdfS4R2K0 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PdfS4R2K0 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PdfS4R2K0 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PdfS4R2K0 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PdfS4R2K0 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
PdfS4R2K0 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC13.37□□□□□ -0.27
PdfS4R2K0 Gm10849-201ENSMUST00000100397 618 ntBASIC13.37□□□□□ -0.27
PdfS4R2K0 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
PdfS4R2K0 Gm8969-201ENSMUST00000199694 526 ntBASIC13.37□□□□□ -0.27
PdfS4R2K0 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC13.37□□□□□ -0.27
PdfS4R2K0 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC13.37□□□□□ -0.27
PdfS4R2K0 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
PdfS4R2K0 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PdfS4R2K0 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
PdfS4R2K0 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PdfS4R2K0 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PdfS4R2K0 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
PdfS4R2K0 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
PdfS4R2K0 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
PdfS4R2K0 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PdfS4R2K0 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
PdfS4R2K0 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PdfS4R2K0 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PdfS4R2K0 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PdfS4R2K0 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PdfS4R2K0 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PdfS4R2K0 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PdfS4R2K0 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
PdfS4R2K0 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
PdfS4R2K0 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PdfS4R2K0 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
PdfS4R2K0 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
PdfS4R2K0 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
PdfS4R2K0 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PdfS4R2K0 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC13.36□□□□□ -0.27
PdfS4R2K0 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PdfS4R2K0 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
PdfS4R2K0 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC13.36□□□□□ -0.27
PdfS4R2K0 Gm27405-201ENSMUST00000184201 112 ntBASIC13.36□□□□□ -0.27
PdfS4R2K0 Gm42569-201ENSMUST00000200539 472 ntBASIC13.36□□□□□ -0.27
PdfS4R2K0 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
PdfS4R2K0 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC13.36□□□□□ -0.27
PdfS4R2K0 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PdfS4R2K0 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC13.36□□□□□ -0.27
PdfS4R2K0 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
PdfS4R2K0 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PdfS4R2K0 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PdfS4R2K0 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PdfS4R2K0 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PdfS4R2K0 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
PdfS4R2K0 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PdfS4R2K0 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
PdfS4R2K0 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC13.35□□□□□ -0.27
PdfS4R2K0 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
PdfS4R2K0 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
PdfS4R2K0 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PdfS4R2K0 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PdfS4R2K0 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC13.35□□□□□ -0.27
PdfS4R2K0 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PdfS4R2K0 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PdfS4R2K0 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PdfS4R2K0 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PdfS4R2K0 Gm9988-201ENSMUST00000069786 435 ntBASIC13.35□□□□□ -0.27
PdfS4R2K0 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PdfS4R2K0 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC13.35□□□□□ -0.27
PdfS4R2K0 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PdfS4R2K0 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
PdfS4R2K0 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PdfS4R2K0 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PdfS4R2K0 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
PdfS4R2K0 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC13.35□□□□□ -0.27
PdfS4R2K0 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
PdfS4R2K0 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
PdfS4R2K0 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
PdfS4R2K0 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PdfS4R2K0 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PdfS4R2K0 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
PdfS4R2K0 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
PdfS4R2K0 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PdfS4R2K0 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC13.34□□□□□ -0.27
PdfS4R2K0 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
PdfS4R2K0 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
PdfS4R2K0 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PdfS4R2K0 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms