Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
H2afb2S4R1M3 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
H2afb2S4R1M3 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
H2afb2S4R1M3 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
H2afb2S4R1M3 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.44■□□□□ 0.38
H2afb2S4R1M3 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
H2afb2S4R1M3 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
H2afb2S4R1M3 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
H2afb2S4R1M3 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
H2afb2S4R1M3 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
H2afb2S4R1M3 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
H2afb2S4R1M3 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
H2afb2S4R1M3 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
H2afb2S4R1M3 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
H2afb2S4R1M3 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
H2afb2S4R1M3 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
H2afb2S4R1M3 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
H2afb2S4R1M3 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
H2afb2S4R1M3 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.43■□□□□ 0.38
H2afb2S4R1M3 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC17.43■□□□□ 0.38
H2afb2S4R1M3 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC17.43■□□□□ 0.38
H2afb2S4R1M3 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
H2afb2S4R1M3 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
H2afb2S4R1M3 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC17.43■□□□□ 0.38
H2afb2S4R1M3 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
H2afb2S4R1M3 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
H2afb2S4R1M3 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
H2afb2S4R1M3 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.43■□□□□ 0.38
H2afb2S4R1M3 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
H2afb2S4R1M3 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
H2afb2S4R1M3 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
H2afb2S4R1M3 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
H2afb2S4R1M3 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
H2afb2S4R1M3 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
H2afb2S4R1M3 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
H2afb2S4R1M3 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
H2afb2S4R1M3 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
H2afb2S4R1M3 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
H2afb2S4R1M3 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
H2afb2S4R1M3 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
H2afb2S4R1M3 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
H2afb2S4R1M3 Gm5643-201ENSMUST00000117081 966 ntBASIC17.42■□□□□ 0.38
H2afb2S4R1M3 Gm37292-201ENSMUST00000192062 758 ntBASIC17.42■□□□□ 0.38
H2afb2S4R1M3 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC17.42■□□□□ 0.38
H2afb2S4R1M3 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
H2afb2S4R1M3 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
H2afb2S4R1M3 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
H2afb2S4R1M3 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
H2afb2S4R1M3 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
H2afb2S4R1M3 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
H2afb2S4R1M3 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
H2afb2S4R1M3 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
H2afb2S4R1M3 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
H2afb2S4R1M3 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
H2afb2S4R1M3 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
H2afb2S4R1M3 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.41■□□□□ 0.38
H2afb2S4R1M3 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
H2afb2S4R1M3 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
H2afb2S4R1M3 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
H2afb2S4R1M3 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
H2afb2S4R1M3 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
H2afb2S4R1M3 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.41■□□□□ 0.38
H2afb2S4R1M3 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC17.41■□□□□ 0.38
H2afb2S4R1M3 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
H2afb2S4R1M3 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
H2afb2S4R1M3 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
H2afb2S4R1M3 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
H2afb2S4R1M3 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
H2afb2S4R1M3 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.41■□□□□ 0.38
H2afb2S4R1M3 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
H2afb2S4R1M3 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC17.41■□□□□ 0.38
H2afb2S4R1M3 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
H2afb2S4R1M3 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
H2afb2S4R1M3 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
H2afb2S4R1M3 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
H2afb2S4R1M3 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
H2afb2S4R1M3 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
H2afb2S4R1M3 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
H2afb2S4R1M3 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
H2afb2S4R1M3 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.4■□□□□ 0.38
H2afb2S4R1M3 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
H2afb2S4R1M3 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
H2afb2S4R1M3 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
H2afb2S4R1M3 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
H2afb2S4R1M3 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
H2afb2S4R1M3 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
H2afb2S4R1M3 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
H2afb2S4R1M3 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
H2afb2S4R1M3 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
H2afb2S4R1M3 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
H2afb2S4R1M3 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.39■□□□□ 0.37
H2afb2S4R1M3 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
H2afb2S4R1M3 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
H2afb2S4R1M3 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
H2afb2S4R1M3 Gm12382-201ENSMUST00000122005 922 ntBASIC17.39■□□□□ 0.37
H2afb2S4R1M3 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
H2afb2S4R1M3 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
H2afb2S4R1M3 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
H2afb2S4R1M3 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
H2afb2S4R1M3 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms