Protein–RNA interactions for Protein: Q9Z262

Cldn6, Claudin-6, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn6Q9Z262 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cldn6Q9Z262 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC16.34■□□□□ 0.21
Cldn6Q9Z262 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cldn6Q9Z262 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC16.34■□□□□ 0.21
Cldn6Q9Z262 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cldn6Q9Z262 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cldn6Q9Z262 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cldn6Q9Z262 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cldn6Q9Z262 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.34■□□□□ 0.21
Cldn6Q9Z262 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cldn6Q9Z262 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Cldn6Q9Z262 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cldn6Q9Z262 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cldn6Q9Z262 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cldn6Q9Z262 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
Cldn6Q9Z262 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cldn6Q9Z262 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cldn6Q9Z262 Gm5643-201ENSMUST00000117081 966 ntBASIC16.33■□□□□ 0.2
Cldn6Q9Z262 Gm37292-201ENSMUST00000192062 758 ntBASIC16.33■□□□□ 0.2
Cldn6Q9Z262 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC16.33■□□□□ 0.2
Cldn6Q9Z262 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cldn6Q9Z262 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cldn6Q9Z262 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Cldn6Q9Z262 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cldn6Q9Z262 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cldn6Q9Z262 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cldn6Q9Z262 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cldn6Q9Z262 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cldn6Q9Z262 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC16.33■□□□□ 0.2
Cldn6Q9Z262 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cldn6Q9Z262 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cldn6Q9Z262 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cldn6Q9Z262 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC16.33■□□□□ 0.2
Cldn6Q9Z262 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cldn6Q9Z262 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cldn6Q9Z262 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cldn6Q9Z262 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cldn6Q9Z262 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cldn6Q9Z262 Gm10653-202ENSMUST00000139570 835 ntBASIC16.32■□□□□ 0.2
Cldn6Q9Z262 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cldn6Q9Z262 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cldn6Q9Z262 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC16.32■□□□□ 0.2
Cldn6Q9Z262 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cldn6Q9Z262 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cldn6Q9Z262 Gm6598-201ENSMUST00000202719 2615 ntBASIC16.32■□□□□ 0.2
Cldn6Q9Z262 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cldn6Q9Z262 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cldn6Q9Z262 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cldn6Q9Z262 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cldn6Q9Z262 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cldn6Q9Z262 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
Cldn6Q9Z262 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cldn6Q9Z262 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cldn6Q9Z262 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cldn6Q9Z262 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC16.31■□□□□ 0.2
Cldn6Q9Z262 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cldn6Q9Z262 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cldn6Q9Z262 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cldn6Q9Z262 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cldn6Q9Z262 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cldn6Q9Z262 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cldn6Q9Z262 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Cldn6Q9Z262 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Cldn6Q9Z262 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Cldn6Q9Z262 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Cldn6Q9Z262 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cldn6Q9Z262 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cldn6Q9Z262 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cldn6Q9Z262 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cldn6Q9Z262 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cldn6Q9Z262 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cldn6Q9Z262 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC16.3■□□□□ 0.2
Cldn6Q9Z262 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cldn6Q9Z262 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cldn6Q9Z262 Gm12382-201ENSMUST00000122005 922 ntBASIC16.3■□□□□ 0.2
Cldn6Q9Z262 Gm12669-201ENSMUST00000122162 1009 ntBASIC16.3■□□□□ 0.2
Cldn6Q9Z262 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC16.3■□□□□ 0.2
Cldn6Q9Z262 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cldn6Q9Z262 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cldn6Q9Z262 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Cldn6Q9Z262 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cldn6Q9Z262 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cldn6Q9Z262 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Cldn6Q9Z262 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Cldn6Q9Z262 Gm43808-201ENSMUST00000202534 2065 ntBASIC16.3■□□□□ 0.2
Cldn6Q9Z262 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cldn6Q9Z262 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cldn6Q9Z262 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cldn6Q9Z262 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Cldn6Q9Z262 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cldn6Q9Z262 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cldn6Q9Z262 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cldn6Q9Z262 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Cldn6Q9Z262 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cldn6Q9Z262 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC16.29■□□□□ 0.2
Cldn6Q9Z262 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cldn6Q9Z262 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cldn6Q9Z262 Gm43183-201ENSMUST00000200632 547 ntBASIC16.29■□□□□ 0.2
Cldn6Q9Z262 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC16.29■□□□□ 0.2
Cldn6Q9Z262 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms