Protein–RNA interactions for Protein: Q9Z0G9

Cldn3, Claudin-3, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn3Q9Z0G9 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cldn3Q9Z0G9 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.62■□□□□ 0.41
Cldn3Q9Z0G9 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cldn3Q9Z0G9 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
Cldn3Q9Z0G9 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cldn3Q9Z0G9 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC17.62■□□□□ 0.41
Cldn3Q9Z0G9 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.62■□□□□ 0.41
Cldn3Q9Z0G9 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cldn3Q9Z0G9 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cldn3Q9Z0G9 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cldn3Q9Z0G9 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Cldn3Q9Z0G9 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cldn3Q9Z0G9 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cldn3Q9Z0G9 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cldn3Q9Z0G9 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cldn3Q9Z0G9 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cldn3Q9Z0G9 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cldn3Q9Z0G9 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cldn3Q9Z0G9 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cldn3Q9Z0G9 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cldn3Q9Z0G9 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Cldn3Q9Z0G9 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
Cldn3Q9Z0G9 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cldn3Q9Z0G9 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC17.61■□□□□ 0.41
Cldn3Q9Z0G9 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cldn3Q9Z0G9 Mir8112-201ENSMUST00000184382 131 ntBASIC17.61■□□□□ 0.41
Cldn3Q9Z0G9 Gm10812-201ENSMUST00000099864 546 ntBASIC17.61■□□□□ 0.41
Cldn3Q9Z0G9 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cldn3Q9Z0G9 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cldn3Q9Z0G9 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cldn3Q9Z0G9 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cldn3Q9Z0G9 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cldn3Q9Z0G9 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cldn3Q9Z0G9 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cldn3Q9Z0G9 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cldn3Q9Z0G9 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cldn3Q9Z0G9 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.6■□□□□ 0.41
Cldn3Q9Z0G9 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cldn3Q9Z0G9 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cldn3Q9Z0G9 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Cldn3Q9Z0G9 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cldn3Q9Z0G9 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cldn3Q9Z0G9 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Cldn3Q9Z0G9 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cldn3Q9Z0G9 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cldn3Q9Z0G9 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cldn3Q9Z0G9 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.6■□□□□ 0.41
Cldn3Q9Z0G9 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.6■□□□□ 0.41
Cldn3Q9Z0G9 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Cldn3Q9Z0G9 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.6■□□□□ 0.41
Cldn3Q9Z0G9 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cldn3Q9Z0G9 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cldn3Q9Z0G9 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cldn3Q9Z0G9 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cldn3Q9Z0G9 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cldn3Q9Z0G9 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Cldn3Q9Z0G9 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cldn3Q9Z0G9 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cldn3Q9Z0G9 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cldn3Q9Z0G9 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
Cldn3Q9Z0G9 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.59■□□□□ 0.41
Cldn3Q9Z0G9 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cldn3Q9Z0G9 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cldn3Q9Z0G9 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cldn3Q9Z0G9 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Cldn3Q9Z0G9 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cldn3Q9Z0G9 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.59■□□□□ 0.41
Cldn3Q9Z0G9 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cldn3Q9Z0G9 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Cldn3Q9Z0G9 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cldn3Q9Z0G9 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cldn3Q9Z0G9 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.58■□□□□ 0.41
Cldn3Q9Z0G9 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cldn3Q9Z0G9 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
Cldn3Q9Z0G9 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cldn3Q9Z0G9 CT010444.2-201ENSMUST00000217877 1629 ntBASIC17.58■□□□□ 0.41
Cldn3Q9Z0G9 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Cldn3Q9Z0G9 Gm43272-201ENSMUST00000200599 1584 ntBASIC17.58■□□□□ 0.41
Cldn3Q9Z0G9 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cldn3Q9Z0G9 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Cldn3Q9Z0G9 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cldn3Q9Z0G9 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cldn3Q9Z0G9 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cldn3Q9Z0G9 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
Cldn3Q9Z0G9 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Cldn3Q9Z0G9 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cldn3Q9Z0G9 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cldn3Q9Z0G9 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cldn3Q9Z0G9 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cldn3Q9Z0G9 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC17.58■□□□□ 0.4
Cldn3Q9Z0G9 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Cldn3Q9Z0G9 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Cldn3Q9Z0G9 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cldn3Q9Z0G9 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cldn3Q9Z0G9 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cldn3Q9Z0G9 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Cldn3Q9Z0G9 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cldn3Q9Z0G9 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cldn3Q9Z0G9 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cldn3Q9Z0G9 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 159.1 ms