Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ClcnkaQ9WUB7 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ClcnkaQ9WUB7 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
ClcnkaQ9WUB7 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ClcnkaQ9WUB7 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC16.03■□□□□ 0.16
ClcnkaQ9WUB7 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
ClcnkaQ9WUB7 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ClcnkaQ9WUB7 Gm20760-201ENSMUST00000179197 648 ntBASIC16.03■□□□□ 0.16
ClcnkaQ9WUB7 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
ClcnkaQ9WUB7 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ClcnkaQ9WUB7 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
ClcnkaQ9WUB7 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ClcnkaQ9WUB7 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ClcnkaQ9WUB7 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
ClcnkaQ9WUB7 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ClcnkaQ9WUB7 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ClcnkaQ9WUB7 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ClcnkaQ9WUB7 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ClcnkaQ9WUB7 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ClcnkaQ9WUB7 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
ClcnkaQ9WUB7 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
ClcnkaQ9WUB7 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
ClcnkaQ9WUB7 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
ClcnkaQ9WUB7 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
ClcnkaQ9WUB7 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ClcnkaQ9WUB7 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
ClcnkaQ9WUB7 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ClcnkaQ9WUB7 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
ClcnkaQ9WUB7 Gm10418-201ENSMUST00000100943 576 ntBASIC16.02■□□□□ 0.16
ClcnkaQ9WUB7 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
ClcnkaQ9WUB7 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ClcnkaQ9WUB7 Gm29791-202ENSMUST00000207888 369 ntBASIC16.02■□□□□ 0.16
ClcnkaQ9WUB7 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
ClcnkaQ9WUB7 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC16.02■□□□□ 0.16
ClcnkaQ9WUB7 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
ClcnkaQ9WUB7 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
ClcnkaQ9WUB7 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC16.02■□□□□ 0.15
ClcnkaQ9WUB7 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
ClcnkaQ9WUB7 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
ClcnkaQ9WUB7 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
ClcnkaQ9WUB7 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
ClcnkaQ9WUB7 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
ClcnkaQ9WUB7 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC16.02■□□□□ 0.15
ClcnkaQ9WUB7 Nrn1-203ENSMUST00000223611 1443 ntBASIC16.02■□□□□ 0.15
ClcnkaQ9WUB7 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ClcnkaQ9WUB7 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ClcnkaQ9WUB7 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ClcnkaQ9WUB7 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
ClcnkaQ9WUB7 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
ClcnkaQ9WUB7 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ClcnkaQ9WUB7 Gm10654-201ENSMUST00000098653 1633 ntBASIC16.01■□□□□ 0.15
ClcnkaQ9WUB7 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
ClcnkaQ9WUB7 Gm43808-201ENSMUST00000202534 2065 ntBASIC16.01■□□□□ 0.15
ClcnkaQ9WUB7 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC16.01■□□□□ 0.15
ClcnkaQ9WUB7 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
ClcnkaQ9WUB7 Gm43338-201ENSMUST00000198617 2223 ntBASIC16.01■□□□□ 0.15
ClcnkaQ9WUB7 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
ClcnkaQ9WUB7 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ClcnkaQ9WUB7 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
ClcnkaQ9WUB7 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ClcnkaQ9WUB7 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ClcnkaQ9WUB7 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC16.01■□□□□ 0.15
ClcnkaQ9WUB7 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
ClcnkaQ9WUB7 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
ClcnkaQ9WUB7 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ClcnkaQ9WUB7 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
ClcnkaQ9WUB7 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
ClcnkaQ9WUB7 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
ClcnkaQ9WUB7 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
ClcnkaQ9WUB7 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC16■□□□□ 0.15
ClcnkaQ9WUB7 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC16■□□□□ 0.15
ClcnkaQ9WUB7 H2-K2-201ENSMUST00000174250 1049 ntBASIC16■□□□□ 0.15
ClcnkaQ9WUB7 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
ClcnkaQ9WUB7 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
ClcnkaQ9WUB7 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC16■□□□□ 0.15
ClcnkaQ9WUB7 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
ClcnkaQ9WUB7 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
ClcnkaQ9WUB7 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC16■□□□□ 0.15
ClcnkaQ9WUB7 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
ClcnkaQ9WUB7 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
ClcnkaQ9WUB7 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
ClcnkaQ9WUB7 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
ClcnkaQ9WUB7 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
ClcnkaQ9WUB7 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
ClcnkaQ9WUB7 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
ClcnkaQ9WUB7 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
ClcnkaQ9WUB7 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
ClcnkaQ9WUB7 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
ClcnkaQ9WUB7 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
ClcnkaQ9WUB7 Gm5643-201ENSMUST00000117081 966 ntBASIC15.99■□□□□ 0.15
ClcnkaQ9WUB7 Gm37820-201ENSMUST00000194021 2147 ntBASIC15.99■□□□□ 0.15
ClcnkaQ9WUB7 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC15.99■□□□□ 0.15
ClcnkaQ9WUB7 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
ClcnkaQ9WUB7 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
ClcnkaQ9WUB7 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
ClcnkaQ9WUB7 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
ClcnkaQ9WUB7 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
ClcnkaQ9WUB7 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
ClcnkaQ9WUB7 Gm45244-201ENSMUST00000211328 2200 ntBASIC15.99■□□□□ 0.15
ClcnkaQ9WUB7 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms