Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cdh17Q9R100 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cdh17Q9R100 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Cdh17Q9R100 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Cdh17Q9R100 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cdh17Q9R100 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Cdh17Q9R100 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.01■□□□□ 0.31
Cdh17Q9R100 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cdh17Q9R100 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cdh17Q9R100 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC17■□□□□ 0.31
Cdh17Q9R100 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cdh17Q9R100 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC17■□□□□ 0.31
Cdh17Q9R100 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cdh17Q9R100 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cdh17Q9R100 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cdh17Q9R100 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cdh17Q9R100 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Cdh17Q9R100 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cdh17Q9R100 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cdh17Q9R100 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Cdh17Q9R100 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Cdh17Q9R100 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC16.99■□□□□ 0.31
Cdh17Q9R100 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC16.99■□□□□ 0.31
Cdh17Q9R100 Gm15375-201ENSMUST00000119510 849 ntBASIC16.99■□□□□ 0.31
Cdh17Q9R100 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC16.99■□□□□ 0.31
Cdh17Q9R100 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Cdh17Q9R100 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Cdh17Q9R100 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Cdh17Q9R100 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC16.99■□□□□ 0.31
Cdh17Q9R100 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Cdh17Q9R100 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Cdh17Q9R100 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cdh17Q9R100 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Cdh17Q9R100 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Cdh17Q9R100 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cdh17Q9R100 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Cdh17Q9R100 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cdh17Q9R100 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Cdh17Q9R100 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cdh17Q9R100 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cdh17Q9R100 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Cdh17Q9R100 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Cdh17Q9R100 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
Cdh17Q9R100 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cdh17Q9R100 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cdh17Q9R100 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cdh17Q9R100 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cdh17Q9R100 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Cdh17Q9R100 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cdh17Q9R100 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Cdh17Q9R100 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.97■□□□□ 0.31
Cdh17Q9R100 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cdh17Q9R100 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC16.97■□□□□ 0.31
Cdh17Q9R100 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.97■□□□□ 0.31
Cdh17Q9R100 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC16.97■□□□□ 0.31
Cdh17Q9R100 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cdh17Q9R100 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Cdh17Q9R100 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cdh17Q9R100 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cdh17Q9R100 Alkbh1-212ENSMUST00000185301 408 ntBASIC16.97■□□□□ 0.31
Cdh17Q9R100 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC16.97■□□□□ 0.31
Cdh17Q9R100 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC16.97■□□□□ 0.31
Cdh17Q9R100 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cdh17Q9R100 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cdh17Q9R100 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cdh17Q9R100 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cdh17Q9R100 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC16.97■□□□□ 0.31
Cdh17Q9R100 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cdh17Q9R100 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cdh17Q9R100 Gm45560-201ENSMUST00000211492 1472 ntBASIC16.97■□□□□ 0.31
Cdh17Q9R100 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cdh17Q9R100 Gm19721-201ENSMUST00000195284 1764 ntBASIC16.97■□□□□ 0.31
Cdh17Q9R100 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Cdh17Q9R100 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Cdh17Q9R100 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cdh17Q9R100 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cdh17Q9R100 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
Cdh17Q9R100 AC163280.1-201ENSMUST00000228194 1100 ntBASIC16.96■□□□□ 0.31
Cdh17Q9R100 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cdh17Q9R100 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Cdh17Q9R100 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cdh17Q9R100 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
Cdh17Q9R100 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Cdh17Q9R100 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
Cdh17Q9R100 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Cdh17Q9R100 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Cdh17Q9R100 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
Cdh17Q9R100 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.3
Cdh17Q9R100 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cdh17Q9R100 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cdh17Q9R100 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cdh17Q9R100 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cdh17Q9R100 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Cdh17Q9R100 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cdh17Q9R100 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Cdh17Q9R100 Gm3807-201ENSMUST00000193520 1168 ntBASIC16.95■□□□□ 0.3
Cdh17Q9R100 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cdh17Q9R100 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC16.95■□□□□ 0.3
Cdh17Q9R100 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cdh17Q9R100 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms