Protein–RNA interactions for Protein: Q9R049

Amfr, E3 ubiquitin-protein ligase AMFR, mousemouse

Predictions only

Length 643 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AmfrQ9R049 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
AmfrQ9R049 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC19.49■□□□□ 0.71
AmfrQ9R049 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC19.49■□□□□ 0.71
AmfrQ9R049 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
AmfrQ9R049 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC19.49■□□□□ 0.71
AmfrQ9R049 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
AmfrQ9R049 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
AmfrQ9R049 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
AmfrQ9R049 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
AmfrQ9R049 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
AmfrQ9R049 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC19.49■□□□□ 0.71
AmfrQ9R049 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
AmfrQ9R049 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
AmfrQ9R049 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
AmfrQ9R049 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
AmfrQ9R049 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC19.48■□□□□ 0.71
AmfrQ9R049 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
AmfrQ9R049 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
AmfrQ9R049 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
AmfrQ9R049 Gm10138-203ENSMUST00000206952 366 ntBASIC19.48■□□□□ 0.71
AmfrQ9R049 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
AmfrQ9R049 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
AmfrQ9R049 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
AmfrQ9R049 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
AmfrQ9R049 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
AmfrQ9R049 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
AmfrQ9R049 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC19.48■□□□□ 0.71
AmfrQ9R049 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
AmfrQ9R049 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
AmfrQ9R049 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
AmfrQ9R049 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
AmfrQ9R049 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
AmfrQ9R049 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC19.47■□□□□ 0.71
AmfrQ9R049 Gm15378-201ENSMUST00000121894 207 ntBASIC19.47■□□□□ 0.71
AmfrQ9R049 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC19.47■□□□□ 0.71
AmfrQ9R049 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC19.47■□□□□ 0.71
AmfrQ9R049 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC19.47■□□□□ 0.71
AmfrQ9R049 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
AmfrQ9R049 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
AmfrQ9R049 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
AmfrQ9R049 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
AmfrQ9R049 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
AmfrQ9R049 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
AmfrQ9R049 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
AmfrQ9R049 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
AmfrQ9R049 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
AmfrQ9R049 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC19.46■□□□□ 0.71
AmfrQ9R049 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
AmfrQ9R049 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC19.46■□□□□ 0.71
AmfrQ9R049 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
AmfrQ9R049 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
AmfrQ9R049 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC19.46■□□□□ 0.71
AmfrQ9R049 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
AmfrQ9R049 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
AmfrQ9R049 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
AmfrQ9R049 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
AmfrQ9R049 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
AmfrQ9R049 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
AmfrQ9R049 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
AmfrQ9R049 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
AmfrQ9R049 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
AmfrQ9R049 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
AmfrQ9R049 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
AmfrQ9R049 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
AmfrQ9R049 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.7
AmfrQ9R049 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
AmfrQ9R049 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
AmfrQ9R049 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC19.45■□□□□ 0.7
AmfrQ9R049 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
AmfrQ9R049 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
AmfrQ9R049 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC19.45■□□□□ 0.7
AmfrQ9R049 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC19.45■□□□□ 0.7
AmfrQ9R049 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC19.45■□□□□ 0.7
AmfrQ9R049 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
AmfrQ9R049 Gm10812-201ENSMUST00000099864 546 ntBASIC19.45■□□□□ 0.7
AmfrQ9R049 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
AmfrQ9R049 Gm43294-201ENSMUST00000202850 2490 ntBASIC19.45■□□□□ 0.7
AmfrQ9R049 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
AmfrQ9R049 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
AmfrQ9R049 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
AmfrQ9R049 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
AmfrQ9R049 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
AmfrQ9R049 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
AmfrQ9R049 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
AmfrQ9R049 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC19.44■□□□□ 0.7
AmfrQ9R049 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC19.44■□□□□ 0.7
AmfrQ9R049 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC19.44■□□□□ 0.7
AmfrQ9R049 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
AmfrQ9R049 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
AmfrQ9R049 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
AmfrQ9R049 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
AmfrQ9R049 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
AmfrQ9R049 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
AmfrQ9R049 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
AmfrQ9R049 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
AmfrQ9R049 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
AmfrQ9R049 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
AmfrQ9R049 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
AmfrQ9R049 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
AmfrQ9R049 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms