Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Clcf1Q9QZM3 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Clcf1Q9QZM3 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Clcf1Q9QZM3 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
Clcf1Q9QZM3 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Clcf1Q9QZM3 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC15.81■□□□□ 0.12
Clcf1Q9QZM3 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Clcf1Q9QZM3 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Clcf1Q9QZM3 Mir7071-201ENSMUST00000184847 69 ntBASIC15.81■□□□□ 0.12
Clcf1Q9QZM3 Gm9484-201ENSMUST00000195892 1159 ntBASIC15.81■□□□□ 0.12
Clcf1Q9QZM3 AC124581.1-201ENSMUST00000225416 1399 ntBASIC15.81■□□□□ 0.12
Clcf1Q9QZM3 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Clcf1Q9QZM3 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Clcf1Q9QZM3 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC15.81■□□□□ 0.12
Clcf1Q9QZM3 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Clcf1Q9QZM3 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Clcf1Q9QZM3 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Clcf1Q9QZM3 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Clcf1Q9QZM3 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Clcf1Q9QZM3 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Clcf1Q9QZM3 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Clcf1Q9QZM3 Gm10654-201ENSMUST00000098653 1633 ntBASIC15.8■□□□□ 0.12
Clcf1Q9QZM3 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Clcf1Q9QZM3 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Clcf1Q9QZM3 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Clcf1Q9QZM3 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
Clcf1Q9QZM3 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Clcf1Q9QZM3 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC15.8■□□□□ 0.12
Clcf1Q9QZM3 Gm12382-201ENSMUST00000122005 922 ntBASIC15.8■□□□□ 0.12
Clcf1Q9QZM3 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Clcf1Q9QZM3 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Clcf1Q9QZM3 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Clcf1Q9QZM3 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC15.8■□□□□ 0.12
Clcf1Q9QZM3 AC166341.7-201ENSMUST00000221698 126 ntBASIC15.8■□□□□ 0.12
Clcf1Q9QZM3 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Clcf1Q9QZM3 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Clcf1Q9QZM3 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Clcf1Q9QZM3 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Clcf1Q9QZM3 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Clcf1Q9QZM3 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
Clcf1Q9QZM3 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Clcf1Q9QZM3 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Clcf1Q9QZM3 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Clcf1Q9QZM3 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Clcf1Q9QZM3 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Clcf1Q9QZM3 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Clcf1Q9QZM3 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC15.79■□□□□ 0.12
Clcf1Q9QZM3 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Clcf1Q9QZM3 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC15.79■□□□□ 0.12
Clcf1Q9QZM3 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC15.79■□□□□ 0.12
Clcf1Q9QZM3 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC15.79■□□□□ 0.12
Clcf1Q9QZM3 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Clcf1Q9QZM3 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Clcf1Q9QZM3 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
Clcf1Q9QZM3 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Clcf1Q9QZM3 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC15.79■□□□□ 0.12
Clcf1Q9QZM3 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Clcf1Q9QZM3 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Clcf1Q9QZM3 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Clcf1Q9QZM3 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Clcf1Q9QZM3 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Clcf1Q9QZM3 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Clcf1Q9QZM3 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Clcf1Q9QZM3 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Clcf1Q9QZM3 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Clcf1Q9QZM3 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Clcf1Q9QZM3 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Clcf1Q9QZM3 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC15.78■□□□□ 0.12
Clcf1Q9QZM3 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC15.78■□□□□ 0.12
Clcf1Q9QZM3 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC15.78■□□□□ 0.12
Clcf1Q9QZM3 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Clcf1Q9QZM3 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Clcf1Q9QZM3 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC15.78■□□□□ 0.12
Clcf1Q9QZM3 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Clcf1Q9QZM3 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Clcf1Q9QZM3 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Clcf1Q9QZM3 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Clcf1Q9QZM3 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Clcf1Q9QZM3 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Clcf1Q9QZM3 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC15.77■□□□□ 0.12
Clcf1Q9QZM3 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Clcf1Q9QZM3 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Clcf1Q9QZM3 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Clcf1Q9QZM3 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Clcf1Q9QZM3 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Clcf1Q9QZM3 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Clcf1Q9QZM3 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
Clcf1Q9QZM3 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Clcf1Q9QZM3 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Clcf1Q9QZM3 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Clcf1Q9QZM3 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Clcf1Q9QZM3 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Clcf1Q9QZM3 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Clcf1Q9QZM3 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Clcf1Q9QZM3 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Clcf1Q9QZM3 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Clcf1Q9QZM3 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Clcf1Q9QZM3 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Clcf1Q9QZM3 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Clcf1Q9QZM3 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms