Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Upf1Q9EPU0 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
Upf1Q9EPU0 Gm14701-201ENSMUST00000117156 348 ntBASIC19.86■□□□□ 0.77
Upf1Q9EPU0 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
Upf1Q9EPU0 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
Upf1Q9EPU0 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC19.86■□□□□ 0.77
Upf1Q9EPU0 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC19.86■□□□□ 0.77
Upf1Q9EPU0 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Upf1Q9EPU0 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Upf1Q9EPU0 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Upf1Q9EPU0 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Upf1Q9EPU0 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Upf1Q9EPU0 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC19.85■□□□□ 0.77
Upf1Q9EPU0 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC19.85■□□□□ 0.77
Upf1Q9EPU0 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC19.85■□□□□ 0.77
Upf1Q9EPU0 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Upf1Q9EPU0 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Upf1Q9EPU0 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Upf1Q9EPU0 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Upf1Q9EPU0 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Upf1Q9EPU0 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Upf1Q9EPU0 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC19.85■□□□□ 0.77
Upf1Q9EPU0 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Upf1Q9EPU0 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.84■□□□□ 0.77
Upf1Q9EPU0 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.84■□□□□ 0.77
Upf1Q9EPU0 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Upf1Q9EPU0 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Upf1Q9EPU0 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Upf1Q9EPU0 Gm25990-201ENSMUST00000102440 86 ntBASIC19.84■□□□□ 0.77
Upf1Q9EPU0 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Upf1Q9EPU0 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC19.84■□□□□ 0.77
Upf1Q9EPU0 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Upf1Q9EPU0 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Upf1Q9EPU0 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Upf1Q9EPU0 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Upf1Q9EPU0 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
Upf1Q9EPU0 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
Upf1Q9EPU0 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Upf1Q9EPU0 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Upf1Q9EPU0 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Upf1Q9EPU0 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Upf1Q9EPU0 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Upf1Q9EPU0 Gm11025-201ENSMUST00000140773 466 ntBASIC19.83■□□□□ 0.77
Upf1Q9EPU0 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC19.83■□□□□ 0.77
Upf1Q9EPU0 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
Upf1Q9EPU0 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC19.83■□□□□ 0.77
Upf1Q9EPU0 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Upf1Q9EPU0 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Upf1Q9EPU0 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Upf1Q9EPU0 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Upf1Q9EPU0 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
Upf1Q9EPU0 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Upf1Q9EPU0 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC19.82■□□□□ 0.76
Upf1Q9EPU0 Gm15173-201ENSMUST00000122049 433 ntBASIC19.82■□□□□ 0.76
Upf1Q9EPU0 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC19.82■□□□□ 0.76
Upf1Q9EPU0 Mir6956-201ENSMUST00000183598 62 ntBASIC19.82■□□□□ 0.76
Upf1Q9EPU0 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Upf1Q9EPU0 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Upf1Q9EPU0 Rbfox2-207ENSMUST00000227533 1041 ntBASIC19.82■□□□□ 0.76
Upf1Q9EPU0 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Upf1Q9EPU0 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Upf1Q9EPU0 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Upf1Q9EPU0 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Upf1Q9EPU0 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Upf1Q9EPU0 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Upf1Q9EPU0 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Upf1Q9EPU0 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC19.81■□□□□ 0.76
Upf1Q9EPU0 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Upf1Q9EPU0 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Upf1Q9EPU0 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Upf1Q9EPU0 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Upf1Q9EPU0 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Upf1Q9EPU0 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Upf1Q9EPU0 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Upf1Q9EPU0 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Upf1Q9EPU0 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Upf1Q9EPU0 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
Upf1Q9EPU0 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC19.8■□□□□ 0.76
Upf1Q9EPU0 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Upf1Q9EPU0 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Upf1Q9EPU0 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Upf1Q9EPU0 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Upf1Q9EPU0 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Upf1Q9EPU0 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC19.8■□□□□ 0.76
Upf1Q9EPU0 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC19.8■□□□□ 0.76
Upf1Q9EPU0 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC19.8■□□□□ 0.76
Upf1Q9EPU0 AV026068-213ENSMUST00000223675 1171 ntBASIC19.8■□□□□ 0.76
Upf1Q9EPU0 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Upf1Q9EPU0 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Upf1Q9EPU0 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Upf1Q9EPU0 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Upf1Q9EPU0 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.8■□□□□ 0.76
Upf1Q9EPU0 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Upf1Q9EPU0 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Upf1Q9EPU0 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Upf1Q9EPU0 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Upf1Q9EPU0 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
Upf1Q9EPU0 Gm4913-201ENSMUST00000117075 1290 ntBASIC19.79■□□□□ 0.76
Upf1Q9EPU0 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC19.79■□□□□ 0.76
Upf1Q9EPU0 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC19.79■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms