Protein–RNA interactions for Protein: Q9D9H3

Mbd3l1, Methyl-CpG-binding domain protein 3-like 1, mousemouse

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mbd3l1Q9D9H3 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Mbd3l1Q9D9H3 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Mbd3l1Q9D9H3 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Mbd3l1Q9D9H3 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Mbd3l1Q9D9H3 Gm37563-201ENSMUST00000192580 1513 ntBASIC15.12■□□□□ 0.01
Mbd3l1Q9D9H3 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Mbd3l1Q9D9H3 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Mbd3l1Q9D9H3 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Mbd3l1Q9D9H3 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Mbd3l1Q9D9H3 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
Mbd3l1Q9D9H3 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Mbd3l1Q9D9H3 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Mbd3l1Q9D9H3 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Mbd3l1Q9D9H3 Gm14523-201ENSMUST00000117260 558 ntBASIC15.11■□□□□ 0.01
Mbd3l1Q9D9H3 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Mbd3l1Q9D9H3 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Mbd3l1Q9D9H3 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Mbd3l1Q9D9H3 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC15.11■□□□□ 0.01
Mbd3l1Q9D9H3 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Mbd3l1Q9D9H3 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Mbd3l1Q9D9H3 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Mbd3l1Q9D9H3 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Mbd3l1Q9D9H3 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Mbd3l1Q9D9H3 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC15.1■□□□□ 0.01
Mbd3l1Q9D9H3 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Mbd3l1Q9D9H3 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Mbd3l1Q9D9H3 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Mbd3l1Q9D9H3 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Mbd3l1Q9D9H3 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Mbd3l1Q9D9H3 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Mbd3l1Q9D9H3 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Mbd3l1Q9D9H3 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Mbd3l1Q9D9H3 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Mbd3l1Q9D9H3 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Mbd3l1Q9D9H3 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Mbd3l1Q9D9H3 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Mbd3l1Q9D9H3 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
Mbd3l1Q9D9H3 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Mbd3l1Q9D9H3 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Mbd3l1Q9D9H3 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Mbd3l1Q9D9H3 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Mbd3l1Q9D9H3 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Mbd3l1Q9D9H3 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Mbd3l1Q9D9H3 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Mbd3l1Q9D9H3 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Mbd3l1Q9D9H3 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Mbd3l1Q9D9H3 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Mbd3l1Q9D9H3 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Mbd3l1Q9D9H3 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Mbd3l1Q9D9H3 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Mbd3l1Q9D9H3 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Mbd3l1Q9D9H3 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Mbd3l1Q9D9H3 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Mbd3l1Q9D9H3 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Mbd3l1Q9D9H3 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Mbd3l1Q9D9H3 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC15.09■□□□□ 0.01
Mbd3l1Q9D9H3 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Mbd3l1Q9D9H3 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Mbd3l1Q9D9H3 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Mbd3l1Q9D9H3 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Mbd3l1Q9D9H3 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
Mbd3l1Q9D9H3 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Mbd3l1Q9D9H3 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Mbd3l1Q9D9H3 Gm16011-201ENSMUST00000121567 2662 ntBASIC15.09■□□□□ 0.01
Mbd3l1Q9D9H3 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Mbd3l1Q9D9H3 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Mbd3l1Q9D9H3 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Mbd3l1Q9D9H3 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC15.08■□□□□ 0.01
Mbd3l1Q9D9H3 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC15.08■□□□□ 0.01
Mbd3l1Q9D9H3 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC15.08■□□□□ 0.01
Mbd3l1Q9D9H3 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Mbd3l1Q9D9H3 AC133083.1-201ENSMUST00000221736 2209 ntBASIC15.08■□□□□ 0
Mbd3l1Q9D9H3 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Mbd3l1Q9D9H3 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Mbd3l1Q9D9H3 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Mbd3l1Q9D9H3 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Mbd3l1Q9D9H3 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Mbd3l1Q9D9H3 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC15.08■□□□□ 0
Mbd3l1Q9D9H3 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC15.08■□□□□ 0
Mbd3l1Q9D9H3 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC15.08■□□□□ 0
Mbd3l1Q9D9H3 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0
Mbd3l1Q9D9H3 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Mbd3l1Q9D9H3 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Mbd3l1Q9D9H3 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC15.08■□□□□ 0
Mbd3l1Q9D9H3 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Mbd3l1Q9D9H3 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Mbd3l1Q9D9H3 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Mbd3l1Q9D9H3 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Mbd3l1Q9D9H3 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Mbd3l1Q9D9H3 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Mbd3l1Q9D9H3 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Mbd3l1Q9D9H3 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
Mbd3l1Q9D9H3 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Mbd3l1Q9D9H3 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC15.07■□□□□ 0
Mbd3l1Q9D9H3 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC15.07■□□□□ 0
Mbd3l1Q9D9H3 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC15.07■□□□□ 0
Mbd3l1Q9D9H3 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Mbd3l1Q9D9H3 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC15.07■□□□□ 0
Mbd3l1Q9D9H3 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Mbd3l1Q9D9H3 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms