Protein–RNA interactions for Protein: Q9D7S9

Chmp5, Charged multivesicular body protein 5, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp5Q9D7S9 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Chmp5Q9D7S9 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Chmp5Q9D7S9 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Chmp5Q9D7S9 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC21.81■■□□□ 1.08
Chmp5Q9D7S9 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Chmp5Q9D7S9 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Chmp5Q9D7S9 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Chmp5Q9D7S9 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Chmp5Q9D7S9 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Chmp5Q9D7S9 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Chmp5Q9D7S9 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC21.8■■□□□ 1.08
Chmp5Q9D7S9 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Chmp5Q9D7S9 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Chmp5Q9D7S9 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC21.8■■□□□ 1.08
Chmp5Q9D7S9 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Chmp5Q9D7S9 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC21.8■■□□□ 1.08
Chmp5Q9D7S9 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
Chmp5Q9D7S9 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Chmp5Q9D7S9 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Chmp5Q9D7S9 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Chmp5Q9D7S9 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Chmp5Q9D7S9 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
Chmp5Q9D7S9 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Chmp5Q9D7S9 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Chmp5Q9D7S9 Gm43272-201ENSMUST00000200599 1584 ntBASIC21.79■■□□□ 1.08
Chmp5Q9D7S9 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Chmp5Q9D7S9 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
Chmp5Q9D7S9 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Chmp5Q9D7S9 Gm2399-201ENSMUST00000104944 225 ntBASIC21.79■■□□□ 1.08
Chmp5Q9D7S9 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Chmp5Q9D7S9 AV356131-201ENSMUST00000206201 750 ntBASIC21.79■■□□□ 1.08
Chmp5Q9D7S9 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC21.79■■□□□ 1.08
Chmp5Q9D7S9 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Chmp5Q9D7S9 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Chmp5Q9D7S9 Zfp783-201ENSMUST00000095946 670 ntBASIC21.79■■□□□ 1.08
Chmp5Q9D7S9 Gm16401-202ENSMUST00000197463 2074 ntBASIC21.79■■□□□ 1.08
Chmp5Q9D7S9 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Chmp5Q9D7S9 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Chmp5Q9D7S9 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Chmp5Q9D7S9 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
Chmp5Q9D7S9 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Chmp5Q9D7S9 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Chmp5Q9D7S9 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Chmp5Q9D7S9 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Chmp5Q9D7S9 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC21.78■■□□□ 1.08
Chmp5Q9D7S9 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Chmp5Q9D7S9 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC21.78■■□□□ 1.08
Chmp5Q9D7S9 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Chmp5Q9D7S9 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Chmp5Q9D7S9 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
Chmp5Q9D7S9 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Chmp5Q9D7S9 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Chmp5Q9D7S9 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC21.78■■□□□ 1.08
Chmp5Q9D7S9 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Chmp5Q9D7S9 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
Chmp5Q9D7S9 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
Chmp5Q9D7S9 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC21.77■■□□□ 1.08
Chmp5Q9D7S9 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Chmp5Q9D7S9 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Chmp5Q9D7S9 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Chmp5Q9D7S9 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC21.77■■□□□ 1.08
Chmp5Q9D7S9 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Chmp5Q9D7S9 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Chmp5Q9D7S9 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Chmp5Q9D7S9 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Chmp5Q9D7S9 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Chmp5Q9D7S9 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Chmp5Q9D7S9 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
Chmp5Q9D7S9 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Chmp5Q9D7S9 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC21.77■■□□□ 1.07
Chmp5Q9D7S9 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Chmp5Q9D7S9 Haglr-201ENSMUST00000100000 2085 ntBASIC21.76■■□□□ 1.07
Chmp5Q9D7S9 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Chmp5Q9D7S9 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Chmp5Q9D7S9 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Chmp5Q9D7S9 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Chmp5Q9D7S9 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Chmp5Q9D7S9 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Chmp5Q9D7S9 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Chmp5Q9D7S9 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Chmp5Q9D7S9 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Chmp5Q9D7S9 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Chmp5Q9D7S9 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Chmp5Q9D7S9 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Chmp5Q9D7S9 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC21.76■■□□□ 1.07
Chmp5Q9D7S9 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC21.76■■□□□ 1.07
Chmp5Q9D7S9 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Chmp5Q9D7S9 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Chmp5Q9D7S9 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Chmp5Q9D7S9 Gm10418-201ENSMUST00000100943 576 ntBASIC21.75■■□□□ 1.07
Chmp5Q9D7S9 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
Chmp5Q9D7S9 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Chmp5Q9D7S9 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC21.75■■□□□ 1.07
Chmp5Q9D7S9 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Chmp5Q9D7S9 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC21.75■■□□□ 1.07
Chmp5Q9D7S9 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Chmp5Q9D7S9 Gm16499-203ENSMUST00000204633 2177 ntBASIC21.75■■□□□ 1.07
Chmp5Q9D7S9 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
Chmp5Q9D7S9 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC21.75■■□□□ 1.07
Chmp5Q9D7S9 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 84.9 ms