Protein–RNA interactions for Protein: Q9D6F9

Tubb4a, Tubulin beta-4A chain, mousemouse

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb4aQ9D6F9 Gm13534-201ENSMUST00000121169 513 ntBASIC18.83■□□□□ 0.6
Tubb4aQ9D6F9 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tubb4aQ9D6F9 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tubb4aQ9D6F9 Gm26596-201ENSMUST00000180464 2655 ntBASIC18.83■□□□□ 0.6
Tubb4aQ9D6F9 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Tubb4aQ9D6F9 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tubb4aQ9D6F9 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.83■□□□□ 0.6
Tubb4aQ9D6F9 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tubb4aQ9D6F9 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tubb4aQ9D6F9 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tubb4aQ9D6F9 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Tubb4aQ9D6F9 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tubb4aQ9D6F9 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tubb4aQ9D6F9 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC18.82■□□□□ 0.6
Tubb4aQ9D6F9 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Tubb4aQ9D6F9 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tubb4aQ9D6F9 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tubb4aQ9D6F9 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tubb4aQ9D6F9 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tubb4aQ9D6F9 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Tubb4aQ9D6F9 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Tubb4aQ9D6F9 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tubb4aQ9D6F9 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tubb4aQ9D6F9 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tubb4aQ9D6F9 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tubb4aQ9D6F9 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Tubb4aQ9D6F9 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tubb4aQ9D6F9 Gm21956-201ENSMUST00000179946 522 ntBASIC18.81■□□□□ 0.6
Tubb4aQ9D6F9 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC18.81■□□□□ 0.6
Tubb4aQ9D6F9 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tubb4aQ9D6F9 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tubb4aQ9D6F9 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Tubb4aQ9D6F9 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tubb4aQ9D6F9 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Tubb4aQ9D6F9 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tubb4aQ9D6F9 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tubb4aQ9D6F9 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tubb4aQ9D6F9 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Tubb4aQ9D6F9 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tubb4aQ9D6F9 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tubb4aQ9D6F9 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Tubb4aQ9D6F9 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tubb4aQ9D6F9 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Tubb4aQ9D6F9 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tubb4aQ9D6F9 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tubb4aQ9D6F9 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tubb4aQ9D6F9 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tubb4aQ9D6F9 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tubb4aQ9D6F9 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Tubb4aQ9D6F9 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tubb4aQ9D6F9 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Tubb4aQ9D6F9 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
Tubb4aQ9D6F9 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tubb4aQ9D6F9 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Tubb4aQ9D6F9 Gm43173-201ENSMUST00000202246 593 ntBASIC18.8■□□□□ 0.6
Tubb4aQ9D6F9 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC18.8■□□□□ 0.6
Tubb4aQ9D6F9 AC140930.3-201ENSMUST00000222935 274 ntBASIC18.8■□□□□ 0.6
Tubb4aQ9D6F9 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Tubb4aQ9D6F9 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tubb4aQ9D6F9 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Tubb4aQ9D6F9 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tubb4aQ9D6F9 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tubb4aQ9D6F9 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tubb4aQ9D6F9 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Tubb4aQ9D6F9 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tubb4aQ9D6F9 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tubb4aQ9D6F9 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tubb4aQ9D6F9 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
Tubb4aQ9D6F9 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tubb4aQ9D6F9 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC18.79■□□□□ 0.6
Tubb4aQ9D6F9 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tubb4aQ9D6F9 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tubb4aQ9D6F9 Gm10418-201ENSMUST00000100943 576 ntBASIC18.79■□□□□ 0.6
Tubb4aQ9D6F9 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Tubb4aQ9D6F9 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC18.79■□□□□ 0.6
Tubb4aQ9D6F9 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC18.79■□□□□ 0.6
Tubb4aQ9D6F9 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tubb4aQ9D6F9 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Tubb4aQ9D6F9 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Tubb4aQ9D6F9 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Tubb4aQ9D6F9 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tubb4aQ9D6F9 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Tubb4aQ9D6F9 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tubb4aQ9D6F9 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tubb4aQ9D6F9 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tubb4aQ9D6F9 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tubb4aQ9D6F9 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tubb4aQ9D6F9 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tubb4aQ9D6F9 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Tubb4aQ9D6F9 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Tubb4aQ9D6F9 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Tubb4aQ9D6F9 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tubb4aQ9D6F9 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tubb4aQ9D6F9 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tubb4aQ9D6F9 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tubb4aQ9D6F9 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tubb4aQ9D6F9 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Tubb4aQ9D6F9 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tubb4aQ9D6F9 Gm29791-202ENSMUST00000207888 369 ntBASIC18.78■□□□□ 0.6
Tubb4aQ9D6F9 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms