Protein–RNA interactions for Protein: Q9D0F1

Ndc80, Kinetochore protein NDC80 homolog, mousemouse

Known RBP Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc80Q9D0F1 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ndc80Q9D0F1 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Ndc80Q9D0F1 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ndc80Q9D0F1 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ndc80Q9D0F1 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ndc80Q9D0F1 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ndc80Q9D0F1 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ndc80Q9D0F1 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ndc80Q9D0F1 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ndc80Q9D0F1 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.71■□□□□ 0.43
Ndc80Q9D0F1 Gm44878-201ENSMUST00000205812 1295 ntBASIC17.71■□□□□ 0.43
Ndc80Q9D0F1 AC135637.1-201ENSMUST00000227750 365 ntBASIC17.71■□□□□ 0.43
Ndc80Q9D0F1 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ndc80Q9D0F1 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ndc80Q9D0F1 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Ndc80Q9D0F1 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ndc80Q9D0F1 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ndc80Q9D0F1 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Ndc80Q9D0F1 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ndc80Q9D0F1 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Ndc80Q9D0F1 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
Ndc80Q9D0F1 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ndc80Q9D0F1 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ndc80Q9D0F1 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ndc80Q9D0F1 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ndc80Q9D0F1 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.7■□□□□ 0.42
Ndc80Q9D0F1 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Ndc80Q9D0F1 Gm15375-201ENSMUST00000119510 849 ntBASIC17.7■□□□□ 0.42
Ndc80Q9D0F1 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC17.7■□□□□ 0.42
Ndc80Q9D0F1 Mir6349-201ENSMUST00000184059 97 ntBASIC17.7■□□□□ 0.42
Ndc80Q9D0F1 Gm18666-201ENSMUST00000190039 958 ntBASIC17.7■□□□□ 0.42
Ndc80Q9D0F1 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC17.7■□□□□ 0.42
Ndc80Q9D0F1 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ndc80Q9D0F1 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.7■□□□□ 0.42
Ndc80Q9D0F1 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ndc80Q9D0F1 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ndc80Q9D0F1 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ndc80Q9D0F1 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ndc80Q9D0F1 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Ndc80Q9D0F1 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ndc80Q9D0F1 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ndc80Q9D0F1 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ndc80Q9D0F1 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ndc80Q9D0F1 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ndc80Q9D0F1 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ndc80Q9D0F1 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ndc80Q9D0F1 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ndc80Q9D0F1 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ndc80Q9D0F1 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ndc80Q9D0F1 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ndc80Q9D0F1 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ndc80Q9D0F1 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.68■□□□□ 0.42
Ndc80Q9D0F1 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Ndc80Q9D0F1 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ndc80Q9D0F1 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ndc80Q9D0F1 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ndc80Q9D0F1 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ndc80Q9D0F1 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Ndc80Q9D0F1 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Ndc80Q9D0F1 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ndc80Q9D0F1 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ndc80Q9D0F1 Gm10418-201ENSMUST00000100943 576 ntBASIC17.68■□□□□ 0.42
Ndc80Q9D0F1 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Ndc80Q9D0F1 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC17.68■□□□□ 0.42
Ndc80Q9D0F1 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ndc80Q9D0F1 Gm10653-202ENSMUST00000139570 835 ntBASIC17.68■□□□□ 0.42
Ndc80Q9D0F1 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Ndc80Q9D0F1 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC17.68■□□□□ 0.42
Ndc80Q9D0F1 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ndc80Q9D0F1 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ndc80Q9D0F1 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Ndc80Q9D0F1 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ndc80Q9D0F1 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ndc80Q9D0F1 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ndc80Q9D0F1 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ndc80Q9D0F1 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ndc80Q9D0F1 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ndc80Q9D0F1 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ndc80Q9D0F1 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ndc80Q9D0F1 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Ndc80Q9D0F1 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ndc80Q9D0F1 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ndc80Q9D0F1 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.67■□□□□ 0.42
Ndc80Q9D0F1 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ndc80Q9D0F1 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ndc80Q9D0F1 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.67■□□□□ 0.42
Ndc80Q9D0F1 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ndc80Q9D0F1 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
Ndc80Q9D0F1 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ndc80Q9D0F1 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ndc80Q9D0F1 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.67■□□□□ 0.42
Ndc80Q9D0F1 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.67■□□□□ 0.42
Ndc80Q9D0F1 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ndc80Q9D0F1 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC17.67■□□□□ 0.42
Ndc80Q9D0F1 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ndc80Q9D0F1 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ndc80Q9D0F1 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ndc80Q9D0F1 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ndc80Q9D0F1 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Ndc80Q9D0F1 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms