Protein–RNA interactions for Protein: Q9CXK8

Nip7, 60S ribosome subunit biogenesis protein NIP7 homolog, mousemouse

Known RBP Predictions only

Length 180 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nip7Q9CXK8 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Nip7Q9CXK8 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Nip7Q9CXK8 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Nip7Q9CXK8 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Nip7Q9CXK8 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Nip7Q9CXK8 Gm6623-201ENSMUST00000173570 544 ntBASIC21.7■■□□□ 1.06
Nip7Q9CXK8 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Nip7Q9CXK8 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Nip7Q9CXK8 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Nip7Q9CXK8 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Nip7Q9CXK8 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Nip7Q9CXK8 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Nip7Q9CXK8 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
Nip7Q9CXK8 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Nip7Q9CXK8 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Nip7Q9CXK8 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Nip7Q9CXK8 Mir770-201ENSMUST00000103252 94 ntBASIC21.69■■□□□ 1.06
Nip7Q9CXK8 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC21.69■■□□□ 1.06
Nip7Q9CXK8 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Nip7Q9CXK8 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Nip7Q9CXK8 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC21.69■■□□□ 1.06
Nip7Q9CXK8 Gm37722-201ENSMUST00000193757 208 ntBASIC21.69■■□□□ 1.06
Nip7Q9CXK8 Gm7461-201ENSMUST00000058918 827 ntBASIC21.69■■□□□ 1.06
Nip7Q9CXK8 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC21.69■■□□□ 1.06
Nip7Q9CXK8 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC21.69■■□□□ 1.06
Nip7Q9CXK8 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Nip7Q9CXK8 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Nip7Q9CXK8 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Nip7Q9CXK8 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Nip7Q9CXK8 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Nip7Q9CXK8 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Nip7Q9CXK8 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
Nip7Q9CXK8 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Nip7Q9CXK8 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Nip7Q9CXK8 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Nip7Q9CXK8 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Nip7Q9CXK8 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Nip7Q9CXK8 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Nip7Q9CXK8 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Nip7Q9CXK8 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Nip7Q9CXK8 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Nip7Q9CXK8 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Nip7Q9CXK8 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Nip7Q9CXK8 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Nip7Q9CXK8 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Nip7Q9CXK8 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Nip7Q9CXK8 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Nip7Q9CXK8 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Nip7Q9CXK8 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Nip7Q9CXK8 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Nip7Q9CXK8 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC21.67■■□□□ 1.06
Nip7Q9CXK8 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Nip7Q9CXK8 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC21.67■■□□□ 1.06
Nip7Q9CXK8 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
Nip7Q9CXK8 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Nip7Q9CXK8 Otx2os1-206ENSMUST00000228153 787 ntBASIC21.67■■□□□ 1.06
Nip7Q9CXK8 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Nip7Q9CXK8 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Nip7Q9CXK8 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Nip7Q9CXK8 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Nip7Q9CXK8 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC21.67■■□□□ 1.06
Nip7Q9CXK8 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Nip7Q9CXK8 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Nip7Q9CXK8 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Nip7Q9CXK8 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Nip7Q9CXK8 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Nip7Q9CXK8 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Nip7Q9CXK8 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
Nip7Q9CXK8 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC21.66■■□□□ 1.06
Nip7Q9CXK8 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC21.66■■□□□ 1.06
Nip7Q9CXK8 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC21.66■■□□□ 1.06
Nip7Q9CXK8 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Nip7Q9CXK8 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Nip7Q9CXK8 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Nip7Q9CXK8 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC21.66■■□□□ 1.06
Nip7Q9CXK8 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Nip7Q9CXK8 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
Nip7Q9CXK8 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Nip7Q9CXK8 Mir3081-201ENSMUST00000175305 84 ntBASIC21.66■■□□□ 1.06
Nip7Q9CXK8 Umpk-ps-201ENSMUST00000211897 827 ntBASIC21.66■■□□□ 1.06
Nip7Q9CXK8 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Nip7Q9CXK8 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Nip7Q9CXK8 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Nip7Q9CXK8 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Nip7Q9CXK8 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Nip7Q9CXK8 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Nip7Q9CXK8 Gm7153-201ENSMUST00000117092 455 ntBASIC21.65■■□□□ 1.06
Nip7Q9CXK8 Mir8112-201ENSMUST00000184382 131 ntBASIC21.65■■□□□ 1.06
Nip7Q9CXK8 Gm27742-201ENSMUST00000184667 60 ntBASIC21.65■■□□□ 1.06
Nip7Q9CXK8 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Nip7Q9CXK8 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Nip7Q9CXK8 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Nip7Q9CXK8 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Nip7Q9CXK8 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC21.65■■□□□ 1.06
Nip7Q9CXK8 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Nip7Q9CXK8 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Nip7Q9CXK8 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Nip7Q9CXK8 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Nip7Q9CXK8 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Nip7Q9CXK8 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms