Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim8Q99PJ2 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Trim8Q99PJ2 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trim8Q99PJ2 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.08■□□□□ 0.33
Trim8Q99PJ2 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim8Q99PJ2 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC17.08■□□□□ 0.32
Trim8Q99PJ2 Gm29257-201ENSMUST00000186115 639 ntBASIC17.08■□□□□ 0.32
Trim8Q99PJ2 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Trim8Q99PJ2 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC17.08■□□□□ 0.32
Trim8Q99PJ2 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim8Q99PJ2 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim8Q99PJ2 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim8Q99PJ2 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim8Q99PJ2 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.08■□□□□ 0.32
Trim8Q99PJ2 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim8Q99PJ2 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim8Q99PJ2 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim8Q99PJ2 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim8Q99PJ2 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim8Q99PJ2 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trim8Q99PJ2 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Trim8Q99PJ2 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim8Q99PJ2 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim8Q99PJ2 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC17.07■□□□□ 0.32
Trim8Q99PJ2 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim8Q99PJ2 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim8Q99PJ2 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim8Q99PJ2 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim8Q99PJ2 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim8Q99PJ2 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trim8Q99PJ2 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim8Q99PJ2 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim8Q99PJ2 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.07■□□□□ 0.32
Trim8Q99PJ2 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim8Q99PJ2 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim8Q99PJ2 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
Trim8Q99PJ2 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim8Q99PJ2 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.06■□□□□ 0.32
Trim8Q99PJ2 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.06■□□□□ 0.32
Trim8Q99PJ2 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim8Q99PJ2 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim8Q99PJ2 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim8Q99PJ2 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim8Q99PJ2 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim8Q99PJ2 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim8Q99PJ2 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC17.06■□□□□ 0.32
Trim8Q99PJ2 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim8Q99PJ2 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim8Q99PJ2 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Trim8Q99PJ2 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trim8Q99PJ2 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trim8Q99PJ2 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.06■□□□□ 0.32
Trim8Q99PJ2 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.06■□□□□ 0.32
Trim8Q99PJ2 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trim8Q99PJ2 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Trim8Q99PJ2 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim8Q99PJ2 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Trim8Q99PJ2 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trim8Q99PJ2 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Trim8Q99PJ2 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim8Q99PJ2 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim8Q99PJ2 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim8Q99PJ2 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC17.05■□□□□ 0.32
Trim8Q99PJ2 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trim8Q99PJ2 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim8Q99PJ2 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim8Q99PJ2 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Trim8Q99PJ2 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim8Q99PJ2 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim8Q99PJ2 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim8Q99PJ2 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trim8Q99PJ2 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.05■□□□□ 0.32
Trim8Q99PJ2 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim8Q99PJ2 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Trim8Q99PJ2 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim8Q99PJ2 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim8Q99PJ2 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC17.04■□□□□ 0.32
Trim8Q99PJ2 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim8Q99PJ2 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim8Q99PJ2 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim8Q99PJ2 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim8Q99PJ2 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim8Q99PJ2 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim8Q99PJ2 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trim8Q99PJ2 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trim8Q99PJ2 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Trim8Q99PJ2 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim8Q99PJ2 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.04■□□□□ 0.32
Trim8Q99PJ2 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim8Q99PJ2 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim8Q99PJ2 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.04■□□□□ 0.32
Trim8Q99PJ2 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim8Q99PJ2 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim8Q99PJ2 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim8Q99PJ2 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Trim8Q99PJ2 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim8Q99PJ2 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim8Q99PJ2 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim8Q99PJ2 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim8Q99PJ2 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms