Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Col25a1Q99MQ5 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Col25a1Q99MQ5 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Col25a1Q99MQ5 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Col25a1Q99MQ5 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Col25a1Q99MQ5 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Col25a1Q99MQ5 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Col25a1Q99MQ5 Gm12895-201ENSMUST00000122214 226 ntBASIC18.02■□□□□ 0.48
Col25a1Q99MQ5 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC18.02■□□□□ 0.48
Col25a1Q99MQ5 AC161829.1-201ENSMUST00000220298 281 ntBASIC18.02■□□□□ 0.48
Col25a1Q99MQ5 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Col25a1Q99MQ5 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Col25a1Q99MQ5 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Col25a1Q99MQ5 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Col25a1Q99MQ5 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Col25a1Q99MQ5 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Col25a1Q99MQ5 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Col25a1Q99MQ5 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Col25a1Q99MQ5 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Col25a1Q99MQ5 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Col25a1Q99MQ5 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Col25a1Q99MQ5 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Col25a1Q99MQ5 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Col25a1Q99MQ5 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC18.01■□□□□ 0.47
Col25a1Q99MQ5 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
Col25a1Q99MQ5 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Col25a1Q99MQ5 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Col25a1Q99MQ5 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Col25a1Q99MQ5 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Col25a1Q99MQ5 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC18.01■□□□□ 0.47
Col25a1Q99MQ5 Gm7213-201ENSMUST00000215977 950 ntBASIC18.01■□□□□ 0.47
Col25a1Q99MQ5 Gm5364-201ENSMUST00000216789 889 ntBASIC18.01■□□□□ 0.47
Col25a1Q99MQ5 AC158982.1-201ENSMUST00000228377 901 ntBASIC18.01■□□□□ 0.47
Col25a1Q99MQ5 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Col25a1Q99MQ5 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Col25a1Q99MQ5 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Col25a1Q99MQ5 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Col25a1Q99MQ5 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Col25a1Q99MQ5 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Col25a1Q99MQ5 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18■□□□□ 0.47
Col25a1Q99MQ5 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Col25a1Q99MQ5 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Col25a1Q99MQ5 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC18■□□□□ 0.47
Col25a1Q99MQ5 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC18■□□□□ 0.47
Col25a1Q99MQ5 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC18■□□□□ 0.47
Col25a1Q99MQ5 AC124569.2-201ENSMUST00000225998 818 ntBASIC18■□□□□ 0.47
Col25a1Q99MQ5 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Col25a1Q99MQ5 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC18■□□□□ 0.47
Col25a1Q99MQ5 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18■□□□□ 0.47
Col25a1Q99MQ5 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Col25a1Q99MQ5 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Col25a1Q99MQ5 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Col25a1Q99MQ5 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Col25a1Q99MQ5 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Col25a1Q99MQ5 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Col25a1Q99MQ5 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Col25a1Q99MQ5 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Col25a1Q99MQ5 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Col25a1Q99MQ5 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC17.99■□□□□ 0.47
Col25a1Q99MQ5 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC17.99■□□□□ 0.47
Col25a1Q99MQ5 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC17.99■□□□□ 0.47
Col25a1Q99MQ5 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC17.99■□□□□ 0.47
Col25a1Q99MQ5 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC17.99■□□□□ 0.47
Col25a1Q99MQ5 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Col25a1Q99MQ5 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Col25a1Q99MQ5 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Col25a1Q99MQ5 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Col25a1Q99MQ5 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Col25a1Q99MQ5 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col25a1Q99MQ5 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Col25a1Q99MQ5 Gm10654-201ENSMUST00000098653 1633 ntBASIC17.98■□□□□ 0.47
Col25a1Q99MQ5 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.98■□□□□ 0.47
Col25a1Q99MQ5 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col25a1Q99MQ5 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col25a1Q99MQ5 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col25a1Q99MQ5 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Col25a1Q99MQ5 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Col25a1Q99MQ5 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.98■□□□□ 0.47
Col25a1Q99MQ5 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Col25a1Q99MQ5 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Col25a1Q99MQ5 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Col25a1Q99MQ5 Gm9694-201ENSMUST00000193347 1189 ntBASIC17.98■□□□□ 0.47
Col25a1Q99MQ5 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col25a1Q99MQ5 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.98■□□□□ 0.47
Col25a1Q99MQ5 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col25a1Q99MQ5 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col25a1Q99MQ5 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col25a1Q99MQ5 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col25a1Q99MQ5 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.98■□□□□ 0.47
Col25a1Q99MQ5 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col25a1Q99MQ5 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Col25a1Q99MQ5 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Col25a1Q99MQ5 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Col25a1Q99MQ5 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Col25a1Q99MQ5 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Col25a1Q99MQ5 Mir770-201ENSMUST00000103252 94 ntBASIC17.97■□□□□ 0.47
Col25a1Q99MQ5 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC17.97■□□□□ 0.47
Col25a1Q99MQ5 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC17.97■□□□□ 0.47
Col25a1Q99MQ5 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC17.97■□□□□ 0.47
Col25a1Q99MQ5 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms