Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Col20a1Q923P0 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Col20a1Q923P0 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC20.58■□□□□ 0.89
Col20a1Q923P0 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Col20a1Q923P0 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Col20a1Q923P0 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Col20a1Q923P0 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Col20a1Q923P0 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Col20a1Q923P0 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Col20a1Q923P0 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC20.58■□□□□ 0.88
Col20a1Q923P0 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Col20a1Q923P0 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Col20a1Q923P0 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Col20a1Q923P0 Spsb2-203ENSMUST00000112473 1322 ntBASIC20.57■□□□□ 0.88
Col20a1Q923P0 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Col20a1Q923P0 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Col20a1Q923P0 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Col20a1Q923P0 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Col20a1Q923P0 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Col20a1Q923P0 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Col20a1Q923P0 Mir1668-201ENSMUST00000184114 107 ntBASIC20.57■□□□□ 0.88
Col20a1Q923P0 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Col20a1Q923P0 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Col20a1Q923P0 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Col20a1Q923P0 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Col20a1Q923P0 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Col20a1Q923P0 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Col20a1Q923P0 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Col20a1Q923P0 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Col20a1Q923P0 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Col20a1Q923P0 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Col20a1Q923P0 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Col20a1Q923P0 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Col20a1Q923P0 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Col20a1Q923P0 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Col20a1Q923P0 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Col20a1Q923P0 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Col20a1Q923P0 AA414768-201ENSMUST00000121924 1257 ntBASIC20.56■□□□□ 0.88
Col20a1Q923P0 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC20.56■□□□□ 0.88
Col20a1Q923P0 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Col20a1Q923P0 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC20.56■□□□□ 0.88
Col20a1Q923P0 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
Col20a1Q923P0 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Col20a1Q923P0 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC20.56■□□□□ 0.88
Col20a1Q923P0 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Col20a1Q923P0 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Col20a1Q923P0 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Col20a1Q923P0 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
Col20a1Q923P0 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Col20a1Q923P0 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Col20a1Q923P0 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Col20a1Q923P0 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Col20a1Q923P0 Gm6728-201ENSMUST00000178117 1065 ntBASIC20.55■□□□□ 0.88
Col20a1Q923P0 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC20.55■□□□□ 0.88
Col20a1Q923P0 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Col20a1Q923P0 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Col20a1Q923P0 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
Col20a1Q923P0 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Col20a1Q923P0 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Col20a1Q923P0 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Col20a1Q923P0 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Col20a1Q923P0 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Col20a1Q923P0 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC20.55■□□□□ 0.88
Col20a1Q923P0 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC20.55■□□□□ 0.88
Col20a1Q923P0 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Col20a1Q923P0 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Col20a1Q923P0 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Col20a1Q923P0 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Col20a1Q923P0 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Col20a1Q923P0 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC20.54■□□□□ 0.88
Col20a1Q923P0 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC20.54■□□□□ 0.88
Col20a1Q923P0 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Col20a1Q923P0 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC20.54■□□□□ 0.88
Col20a1Q923P0 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Col20a1Q923P0 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Col20a1Q923P0 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Col20a1Q923P0 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Col20a1Q923P0 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Col20a1Q923P0 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Col20a1Q923P0 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Col20a1Q923P0 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Col20a1Q923P0 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Col20a1Q923P0 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Col20a1Q923P0 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Col20a1Q923P0 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Col20a1Q923P0 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Col20a1Q923P0 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Col20a1Q923P0 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Col20a1Q923P0 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Col20a1Q923P0 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC20.53■□□□□ 0.88
Col20a1Q923P0 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Col20a1Q923P0 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Col20a1Q923P0 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Col20a1Q923P0 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Col20a1Q923P0 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Col20a1Q923P0 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Col20a1Q923P0 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC20.53■□□□□ 0.88
Col20a1Q923P0 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC20.53■□□□□ 0.88
Col20a1Q923P0 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Col20a1Q923P0 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms