Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smc1bQ920F6 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smc1bQ920F6 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smc1bQ920F6 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Smc1bQ920F6 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smc1bQ920F6 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smc1bQ920F6 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC20.06■□□□□ 0.8
Smc1bQ920F6 Gm8309-201ENSMUST00000206627 1448 ntBASIC20.06■□□□□ 0.8
Smc1bQ920F6 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC20.06■□□□□ 0.8
Smc1bQ920F6 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smc1bQ920F6 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smc1bQ920F6 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Smc1bQ920F6 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smc1bQ920F6 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Smc1bQ920F6 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smc1bQ920F6 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smc1bQ920F6 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Smc1bQ920F6 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Smc1bQ920F6 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC20.05■□□□□ 0.8
Smc1bQ920F6 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Smc1bQ920F6 Gm27463-201ENSMUST00000183569 57 ntBASIC20.05■□□□□ 0.8
Smc1bQ920F6 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
Smc1bQ920F6 AC166341.7-201ENSMUST00000221698 126 ntBASIC20.05■□□□□ 0.8
Smc1bQ920F6 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Smc1bQ920F6 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
Smc1bQ920F6 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Smc1bQ920F6 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Smc1bQ920F6 Gm43702-201ENSMUST00000198772 2546 ntBASIC20.05■□□□□ 0.8
Smc1bQ920F6 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Smc1bQ920F6 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Smc1bQ920F6 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Smc1bQ920F6 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Smc1bQ920F6 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Smc1bQ920F6 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smc1bQ920F6 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smc1bQ920F6 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smc1bQ920F6 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Smc1bQ920F6 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smc1bQ920F6 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smc1bQ920F6 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smc1bQ920F6 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smc1bQ920F6 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smc1bQ920F6 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smc1bQ920F6 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smc1bQ920F6 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smc1bQ920F6 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smc1bQ920F6 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smc1bQ920F6 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Smc1bQ920F6 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smc1bQ920F6 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smc1bQ920F6 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
Smc1bQ920F6 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smc1bQ920F6 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
Smc1bQ920F6 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC20.03■□□□□ 0.8
Smc1bQ920F6 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC20.03■□□□□ 0.8
Smc1bQ920F6 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC20.03■□□□□ 0.8
Smc1bQ920F6 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC20.03■□□□□ 0.8
Smc1bQ920F6 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smc1bQ920F6 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smc1bQ920F6 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Smc1bQ920F6 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smc1bQ920F6 Gm7856-201ENSMUST00000117514 1493 ntBASIC20.03■□□□□ 0.8
Smc1bQ920F6 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
Smc1bQ920F6 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smc1bQ920F6 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Smc1bQ920F6 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Smc1bQ920F6 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Smc1bQ920F6 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Smc1bQ920F6 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Smc1bQ920F6 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Smc1bQ920F6 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Smc1bQ920F6 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Smc1bQ920F6 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Smc1bQ920F6 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Smc1bQ920F6 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC20.02■□□□□ 0.8
Smc1bQ920F6 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC20.02■□□□□ 0.8
Smc1bQ920F6 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Smc1bQ920F6 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC20.02■□□□□ 0.8
Smc1bQ920F6 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Smc1bQ920F6 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Smc1bQ920F6 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Smc1bQ920F6 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Smc1bQ920F6 Mir5130-201ENSMUST00000175160 84 ntBASIC20.01■□□□□ 0.79
Smc1bQ920F6 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Smc1bQ920F6 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC20.01■□□□□ 0.79
Smc1bQ920F6 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Smc1bQ920F6 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Smc1bQ920F6 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Smc1bQ920F6 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC20.01■□□□□ 0.79
Smc1bQ920F6 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Smc1bQ920F6 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Smc1bQ920F6 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Smc1bQ920F6 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Smc1bQ920F6 Gm43213-201ENSMUST00000151866 1790 ntBASIC20■□□□□ 0.79
Smc1bQ920F6 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Smc1bQ920F6 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Smc1bQ920F6 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Smc1bQ920F6 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Smc1bQ920F6 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC20■□□□□ 0.79
Smc1bQ920F6 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms