Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC16.8■□□□□ 0.28
Pcdhb20Q91XZ9 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb20Q91XZ9 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb20Q91XZ9 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Pcdhb20Q91XZ9 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC16.8■□□□□ 0.28
Pcdhb20Q91XZ9 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC16.8■□□□□ 0.28
Pcdhb20Q91XZ9 Olfr1460-ps1-201ENSMUST00000208975 899 ntBASIC16.8■□□□□ 0.28
Pcdhb20Q91XZ9 Otx2os1-204ENSMUST00000227221 751 ntBASIC16.8■□□□□ 0.28
Pcdhb20Q91XZ9 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb20Q91XZ9 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb20Q91XZ9 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC16.8■□□□□ 0.28
Pcdhb20Q91XZ9 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb20Q91XZ9 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb20Q91XZ9 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb20Q91XZ9 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb20Q91XZ9 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Pcdhb20Q91XZ9 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb20Q91XZ9 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb20Q91XZ9 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb20Q91XZ9 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb20Q91XZ9 Gm12085-201ENSMUST00000119263 940 ntBASIC16.79■□□□□ 0.28
Pcdhb20Q91XZ9 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb20Q91XZ9 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC16.79■□□□□ 0.28
Pcdhb20Q91XZ9 Gm30025-201ENSMUST00000218555 728 ntBASIC16.79■□□□□ 0.28
Pcdhb20Q91XZ9 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Pcdhb20Q91XZ9 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb20Q91XZ9 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb20Q91XZ9 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb20Q91XZ9 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb20Q91XZ9 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb20Q91XZ9 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb20Q91XZ9 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb20Q91XZ9 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb20Q91XZ9 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb20Q91XZ9 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb20Q91XZ9 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC16.78■□□□□ 0.28
Pcdhb20Q91XZ9 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC16.78■□□□□ 0.28
Pcdhb20Q91XZ9 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb20Q91XZ9 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb20Q91XZ9 Gm16833-202ENSMUST00000189204 672 ntTSL 2 BASIC16.78■□□□□ 0.28
Pcdhb20Q91XZ9 AU017674-201ENSMUST00000222864 720 ntTSL 3 BASIC16.78■□□□□ 0.28
Pcdhb20Q91XZ9 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb20Q91XZ9 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Pcdhb20Q91XZ9 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb20Q91XZ9 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb20Q91XZ9 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb20Q91XZ9 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC16.77■□□□□ 0.28
Pcdhb20Q91XZ9 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhb20Q91XZ9 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhb20Q91XZ9 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Pcdhb20Q91XZ9 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Pcdhb20Q91XZ9 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhb20Q91XZ9 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhb20Q91XZ9 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhb20Q91XZ9 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhb20Q91XZ9 Krtap5-1-202ENSMUST00000188274 742 ntBASIC16.77■□□□□ 0.28
Pcdhb20Q91XZ9 Gm38027-201ENSMUST00000192315 235 ntBASIC16.77■□□□□ 0.28
Pcdhb20Q91XZ9 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhb20Q91XZ9 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhb20Q91XZ9 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhb20Q91XZ9 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhb20Q91XZ9 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhb20Q91XZ9 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdhb20Q91XZ9 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdhb20Q91XZ9 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
Pcdhb20Q91XZ9 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdhb20Q91XZ9 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdhb20Q91XZ9 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdhb20Q91XZ9 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Pcdhb20Q91XZ9 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb20Q91XZ9 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC16.76■□□□□ 0.27
Pcdhb20Q91XZ9 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb20Q91XZ9 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Pcdhb20Q91XZ9 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Pcdhb20Q91XZ9 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb20Q91XZ9 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb20Q91XZ9 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb20Q91XZ9 Gm12439-201ENSMUST00000117162 365 ntBASIC16.76■□□□□ 0.27
Pcdhb20Q91XZ9 Tbata-210ENSMUST00000151886 915 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb20Q91XZ9 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC16.76■□□□□ 0.27
Pcdhb20Q91XZ9 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb20Q91XZ9 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb20Q91XZ9 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb20Q91XZ9 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb20Q91XZ9 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb20Q91XZ9 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb20Q91XZ9 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb20Q91XZ9 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb20Q91XZ9 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb20Q91XZ9 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Pcdhb20Q91XZ9 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb20Q91XZ9 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb20Q91XZ9 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb20Q91XZ9 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb20Q91XZ9 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb20Q91XZ9 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb20Q91XZ9 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Pcdhb20Q91XZ9 Gm19331-201ENSMUST00000193799 1092 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb20Q91XZ9 Gm43275-201ENSMUST00000202053 1020 ntBASIC16.75■□□□□ 0.27
Pcdhb20Q91XZ9 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms