Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC17.31■□□□□ 0.36
Pcdhb4Q91XZ6 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb4Q91XZ6 Gm44672-201ENSMUST00000206944 1098 ntBASIC17.31■□□□□ 0.36
Pcdhb4Q91XZ6 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Pcdhb4Q91XZ6 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Pcdhb4Q91XZ6 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb4Q91XZ6 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Pcdhb4Q91XZ6 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb4Q91XZ6 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb4Q91XZ6 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb4Q91XZ6 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb4Q91XZ6 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb4Q91XZ6 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb4Q91XZ6 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC17.3■□□□□ 0.36
Pcdhb4Q91XZ6 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.3■□□□□ 0.36
Pcdhb4Q91XZ6 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.3■□□□□ 0.36
Pcdhb4Q91XZ6 Gm20628-201ENSMUST00000177363 3215 ntBASIC17.3■□□□□ 0.36
Pcdhb4Q91XZ6 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb4Q91XZ6 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb4Q91XZ6 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb4Q91XZ6 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb4Q91XZ6 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb4Q91XZ6 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb4Q91XZ6 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC17.3■□□□□ 0.36
Pcdhb4Q91XZ6 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Pcdhb4Q91XZ6 Gm3807-201ENSMUST00000193520 1168 ntBASIC17.3■□□□□ 0.36
Pcdhb4Q91XZ6 AC122769.4-201ENSMUST00000228166 901 ntBASIC17.3■□□□□ 0.36
Pcdhb4Q91XZ6 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb4Q91XZ6 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb4Q91XZ6 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb4Q91XZ6 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb4Q91XZ6 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb4Q91XZ6 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.3■□□□□ 0.36
Pcdhb4Q91XZ6 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb4Q91XZ6 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb4Q91XZ6 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb4Q91XZ6 Gm43859-201ENSMUST00000200075 1412 ntBASIC17.3■□□□□ 0.36
Pcdhb4Q91XZ6 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb4Q91XZ6 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb4Q91XZ6 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Pcdhb4Q91XZ6 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb4Q91XZ6 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Pcdhb4Q91XZ6 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC17.29■□□□□ 0.36
Pcdhb4Q91XZ6 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Pcdhb4Q91XZ6 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb4Q91XZ6 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb4Q91XZ6 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb4Q91XZ6 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb4Q91XZ6 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb4Q91XZ6 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Pcdhb4Q91XZ6 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb4Q91XZ6 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb4Q91XZ6 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb4Q91XZ6 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb4Q91XZ6 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb4Q91XZ6 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb4Q91XZ6 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb4Q91XZ6 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb4Q91XZ6 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb4Q91XZ6 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb4Q91XZ6 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb4Q91XZ6 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb4Q91XZ6 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.28■□□□□ 0.36
Pcdhb4Q91XZ6 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb4Q91XZ6 Gm11927-201ENSMUST00000118472 759 ntBASIC17.28■□□□□ 0.36
Pcdhb4Q91XZ6 Gm15847-201ENSMUST00000121417 1065 ntBASIC17.28■□□□□ 0.36
Pcdhb4Q91XZ6 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Pcdhb4Q91XZ6 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC17.28■□□□□ 0.36
Pcdhb4Q91XZ6 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC17.28■□□□□ 0.36
Pcdhb4Q91XZ6 Gm10602-201ENSMUST00000098239 609 ntBASIC17.28■□□□□ 0.36
Pcdhb4Q91XZ6 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb4Q91XZ6 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb4Q91XZ6 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb4Q91XZ6 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb4Q91XZ6 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.28■□□□□ 0.36
Pcdhb4Q91XZ6 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhb4Q91XZ6 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhb4Q91XZ6 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhb4Q91XZ6 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhb4Q91XZ6 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.27■□□□□ 0.36
Pcdhb4Q91XZ6 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhb4Q91XZ6 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhb4Q91XZ6 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhb4Q91XZ6 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhb4Q91XZ6 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.27■□□□□ 0.36
Pcdhb4Q91XZ6 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhb4Q91XZ6 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhb4Q91XZ6 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Pcdhb4Q91XZ6 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhb4Q91XZ6 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhb4Q91XZ6 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Pcdhb4Q91XZ6 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Pcdhb4Q91XZ6 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Pcdhb4Q91XZ6 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
Pcdhb4Q91XZ6 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pcdhb4Q91XZ6 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pcdhb4Q91XZ6 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhb4Q91XZ6 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhb4Q91XZ6 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhb4Q91XZ6 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms