Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhb5Q91XZ5 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhb5Q91XZ5 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdhb5Q91XZ5 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdhb5Q91XZ5 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdhb5Q91XZ5 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdhb5Q91XZ5 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdhb5Q91XZ5 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdhb5Q91XZ5 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdhb5Q91XZ5 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC20.55■□□□□ 0.88
Pcdhb5Q91XZ5 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdhb5Q91XZ5 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Pcdhb5Q91XZ5 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
Pcdhb5Q91XZ5 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdhb5Q91XZ5 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdhb5Q91XZ5 Gm11355-201ENSMUST00000121120 306 ntBASIC20.54■□□□□ 0.88
Pcdhb5Q91XZ5 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdhb5Q91XZ5 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC20.54■□□□□ 0.88
Pcdhb5Q91XZ5 Gm27704-201ENSMUST00000185094 107 ntBASIC20.54■□□□□ 0.88
Pcdhb5Q91XZ5 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdhb5Q91XZ5 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdhb5Q91XZ5 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdhb5Q91XZ5 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdhb5Q91XZ5 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdhb5Q91XZ5 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdhb5Q91XZ5 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC20.53■□□□□ 0.88
Pcdhb5Q91XZ5 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhb5Q91XZ5 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhb5Q91XZ5 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
Pcdhb5Q91XZ5 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhb5Q91XZ5 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhb5Q91XZ5 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC20.53■□□□□ 0.88
Pcdhb5Q91XZ5 Gm29518-201ENSMUST00000190858 372 ntBASIC20.53■□□□□ 0.88
Pcdhb5Q91XZ5 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhb5Q91XZ5 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhb5Q91XZ5 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhb5Q91XZ5 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhb5Q91XZ5 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhb5Q91XZ5 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhb5Q91XZ5 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Pcdhb5Q91XZ5 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhb5Q91XZ5 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Pcdhb5Q91XZ5 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhb5Q91XZ5 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhb5Q91XZ5 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Pcdhb5Q91XZ5 Gm45141-201ENSMUST00000206502 1888 ntBASIC20.52■□□□□ 0.88
Pcdhb5Q91XZ5 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdhb5Q91XZ5 Gm26039-201ENSMUST00000158152 144 ntBASIC20.52■□□□□ 0.88
Pcdhb5Q91XZ5 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdhb5Q91XZ5 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdhb5Q91XZ5 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdhb5Q91XZ5 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdhb5Q91XZ5 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
Pcdhb5Q91XZ5 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhb5Q91XZ5 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhb5Q91XZ5 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhb5Q91XZ5 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhb5Q91XZ5 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
Pcdhb5Q91XZ5 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Pcdhb5Q91XZ5 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhb5Q91XZ5 Gm3272-201ENSMUST00000181181 1229 ntBASIC20.51■□□□□ 0.87
Pcdhb5Q91XZ5 Mir8112-201ENSMUST00000184382 131 ntBASIC20.51■□□□□ 0.87
Pcdhb5Q91XZ5 Gm27741-201ENSMUST00000185060 237 ntBASIC20.51■□□□□ 0.87
Pcdhb5Q91XZ5 Gm10566-201ENSMUST00000086739 996 ntBASIC20.51■□□□□ 0.87
Pcdhb5Q91XZ5 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhb5Q91XZ5 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhb5Q91XZ5 Gm43272-201ENSMUST00000200599 1584 ntBASIC20.51■□□□□ 0.87
Pcdhb5Q91XZ5 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdhb5Q91XZ5 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdhb5Q91XZ5 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdhb5Q91XZ5 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
Pcdhb5Q91XZ5 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdhb5Q91XZ5 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC20.5■□□□□ 0.87
Pcdhb5Q91XZ5 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdhb5Q91XZ5 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdhb5Q91XZ5 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Pcdhb5Q91XZ5 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC20.5■□□□□ 0.87
Pcdhb5Q91XZ5 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Pcdhb5Q91XZ5 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC20.5■□□□□ 0.87
Pcdhb5Q91XZ5 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC20.5■□□□□ 0.87
Pcdhb5Q91XZ5 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdhb5Q91XZ5 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Pcdhb5Q91XZ5 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Pcdhb5Q91XZ5 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Pcdhb5Q91XZ5 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Pcdhb5Q91XZ5 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdhb5Q91XZ5 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdhb5Q91XZ5 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdhb5Q91XZ5 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdhb5Q91XZ5 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdhb5Q91XZ5 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Pcdhb5Q91XZ5 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC20.49■□□□□ 0.87
Pcdhb5Q91XZ5 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC20.49■□□□□ 0.87
Pcdhb5Q91XZ5 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdhb5Q91XZ5 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdhb5Q91XZ5 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdhb5Q91XZ5 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdhb5Q91XZ5 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdhb5Q91XZ5 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdhb5Q91XZ5 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms