Protein–RNA interactions for Protein: Q91XX9

Pcdhga9, Protocadherin gamma A9, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga9Q91XX9 Mir8112-201ENSMUST00000184382 131 ntBASIC17.25■□□□□ 0.35
Pcdhga9Q91XX9 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhga9Q91XX9 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhga9Q91XX9 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhga9Q91XX9 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhga9Q91XX9 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhga9Q91XX9 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.25■□□□□ 0.35
Pcdhga9Q91XX9 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Pcdhga9Q91XX9 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhga9Q91XX9 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhga9Q91XX9 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhga9Q91XX9 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
Pcdhga9Q91XX9 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhga9Q91XX9 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhga9Q91XX9 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhga9Q91XX9 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhga9Q91XX9 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Pcdhga9Q91XX9 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.24■□□□□ 0.35
Pcdhga9Q91XX9 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhga9Q91XX9 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
Pcdhga9Q91XX9 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.24■□□□□ 0.35
Pcdhga9Q91XX9 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC17.24■□□□□ 0.35
Pcdhga9Q91XX9 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC17.24■□□□□ 0.35
Pcdhga9Q91XX9 Gm29994-201ENSMUST00000195495 1193 ntBASIC17.24■□□□□ 0.35
Pcdhga9Q91XX9 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhga9Q91XX9 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhga9Q91XX9 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhga9Q91XX9 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhga9Q91XX9 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhga9Q91XX9 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhga9Q91XX9 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhga9Q91XX9 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhga9Q91XX9 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.24■□□□□ 0.35
Pcdhga9Q91XX9 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhga9Q91XX9 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhga9Q91XX9 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhga9Q91XX9 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhga9Q91XX9 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.24■□□□□ 0.35
Pcdhga9Q91XX9 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhga9Q91XX9 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhga9Q91XX9 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhga9Q91XX9 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhga9Q91XX9 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhga9Q91XX9 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC17.23■□□□□ 0.35
Pcdhga9Q91XX9 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhga9Q91XX9 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhga9Q91XX9 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.23■□□□□ 0.35
Pcdhga9Q91XX9 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhga9Q91XX9 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC17.23■□□□□ 0.35
Pcdhga9Q91XX9 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhga9Q91XX9 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhga9Q91XX9 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhga9Q91XX9 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhga9Q91XX9 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhga9Q91XX9 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhga9Q91XX9 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
Pcdhga9Q91XX9 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhga9Q91XX9 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhga9Q91XX9 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Pcdhga9Q91XX9 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC17.22■□□□□ 0.35
Pcdhga9Q91XX9 Mir5122-201ENSMUST00000175004 89 ntBASIC17.22■□□□□ 0.35
Pcdhga9Q91XX9 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhga9Q91XX9 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhga9Q91XX9 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhga9Q91XX9 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhga9Q91XX9 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhga9Q91XX9 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhga9Q91XX9 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhga9Q91XX9 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhga9Q91XX9 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.21■□□□□ 0.35
Pcdhga9Q91XX9 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhga9Q91XX9 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhga9Q91XX9 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.21■□□□□ 0.35
Pcdhga9Q91XX9 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhga9Q91XX9 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhga9Q91XX9 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhga9Q91XX9 Gm43272-201ENSMUST00000200599 1584 ntBASIC17.21■□□□□ 0.35
Pcdhga9Q91XX9 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhga9Q91XX9 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhga9Q91XX9 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhga9Q91XX9 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhga9Q91XX9 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhga9Q91XX9 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Pcdhga9Q91XX9 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Pcdhga9Q91XX9 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhga9Q91XX9 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhga9Q91XX9 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhga9Q91XX9 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Pcdhga9Q91XX9 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhga9Q91XX9 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhga9Q91XX9 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.2■□□□□ 0.34
Pcdhga9Q91XX9 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
Pcdhga9Q91XX9 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC17.2■□□□□ 0.34
Pcdhga9Q91XX9 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC17.2■□□□□ 0.34
Pcdhga9Q91XX9 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Pcdhga9Q91XX9 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhga9Q91XX9 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhga9Q91XX9 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhga9Q91XX9 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhga9Q91XX9 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms