Protein–RNA interactions for Protein: Q91XX7

Pcdhgb2, Protocadherin gamma B2, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb2Q91XX7 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhgb2Q91XX7 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhgb2Q91XX7 AC099934.2-201ENSMUST00000196389 70 ntBASIC16.4■□□□□ 0.22
Pcdhgb2Q91XX7 AC156953.1-201ENSMUST00000196953 70 ntBASIC16.4■□□□□ 0.22
Pcdhgb2Q91XX7 AC157822.2-201ENSMUST00000200291 70 ntBASIC16.4■□□□□ 0.22
Pcdhgb2Q91XX7 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhgb2Q91XX7 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhgb2Q91XX7 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhgb2Q91XX7 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhgb2Q91XX7 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Pcdhgb2Q91XX7 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Pcdhgb2Q91XX7 Gm45774-201ENSMUST00000211992 2665 ntBASIC16.4■□□□□ 0.22
Pcdhgb2Q91XX7 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhgb2Q91XX7 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhgb2Q91XX7 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Pcdhgb2Q91XX7 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhgb2Q91XX7 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhgb2Q91XX7 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhgb2Q91XX7 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Pcdhgb2Q91XX7 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Pcdhgb2Q91XX7 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhgb2Q91XX7 Gm29791-202ENSMUST00000207888 369 ntBASIC16.39■□□□□ 0.21
Pcdhgb2Q91XX7 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC16.39■□□□□ 0.21
Pcdhgb2Q91XX7 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhgb2Q91XX7 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
Pcdhgb2Q91XX7 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC16.39■□□□□ 0.21
Pcdhgb2Q91XX7 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhgb2Q91XX7 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhgb2Q91XX7 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhgb2Q91XX7 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhgb2Q91XX7 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhgb2Q91XX7 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhgb2Q91XX7 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhgb2Q91XX7 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhgb2Q91XX7 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Pcdhgb2Q91XX7 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhgb2Q91XX7 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Pcdhgb2Q91XX7 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhgb2Q91XX7 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhgb2Q91XX7 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC16.38■□□□□ 0.21
Pcdhgb2Q91XX7 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhgb2Q91XX7 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhgb2Q91XX7 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.38■□□□□ 0.21
Pcdhgb2Q91XX7 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Pcdhgb2Q91XX7 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC16.38■□□□□ 0.21
Pcdhgb2Q91XX7 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhgb2Q91XX7 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhgb2Q91XX7 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhgb2Q91XX7 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhgb2Q91XX7 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Pcdhgb2Q91XX7 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Pcdhgb2Q91XX7 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhgb2Q91XX7 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhgb2Q91XX7 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhgb2Q91XX7 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhgb2Q91XX7 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhgb2Q91XX7 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhgb2Q91XX7 Mir8112-201ENSMUST00000184382 131 ntBASIC16.37■□□□□ 0.21
Pcdhgb2Q91XX7 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC16.37■□□□□ 0.21
Pcdhgb2Q91XX7 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhgb2Q91XX7 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Pcdhgb2Q91XX7 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhgb2Q91XX7 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.37■□□□□ 0.21
Pcdhgb2Q91XX7 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhgb2Q91XX7 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhgb2Q91XX7 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhgb2Q91XX7 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC16.36■□□□□ 0.21
Pcdhgb2Q91XX7 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhgb2Q91XX7 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC16.36■□□□□ 0.21
Pcdhgb2Q91XX7 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhgb2Q91XX7 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC16.36■□□□□ 0.21
Pcdhgb2Q91XX7 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhgb2Q91XX7 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhgb2Q91XX7 Gm38285-201ENSMUST00000192928 922 ntBASIC16.36■□□□□ 0.21
Pcdhgb2Q91XX7 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Pcdhgb2Q91XX7 AC140264.2-202ENSMUST00000218746 817 ntBASIC16.36■□□□□ 0.21
Pcdhgb2Q91XX7 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhgb2Q91XX7 Gm13509-201ENSMUST00000119733 1308 ntBASIC16.36■□□□□ 0.21
Pcdhgb2Q91XX7 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhgb2Q91XX7 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhgb2Q91XX7 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhgb2Q91XX7 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhgb2Q91XX7 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhgb2Q91XX7 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhgb2Q91XX7 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhgb2Q91XX7 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhgb2Q91XX7 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhgb2Q91XX7 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhgb2Q91XX7 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.35■□□□□ 0.21
Pcdhgb2Q91XX7 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhgb2Q91XX7 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhgb2Q91XX7 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhgb2Q91XX7 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhgb2Q91XX7 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhgb2Q91XX7 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhgb2Q91XX7 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhgb2Q91XX7 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
Pcdhgb2Q91XX7 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhgb2Q91XX7 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhgb2Q91XX7 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC16.35■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms