Protein–RNA interactions for Protein: Q8VEE1

Lmcd1, LIM and cysteine-rich domains protein 1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmcd1Q8VEE1 AC161829.1-201ENSMUST00000220298 281 ntBASIC18.53■□□□□ 0.56
Lmcd1Q8VEE1 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lmcd1Q8VEE1 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lmcd1Q8VEE1 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Lmcd1Q8VEE1 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lmcd1Q8VEE1 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lmcd1Q8VEE1 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lmcd1Q8VEE1 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC18.53■□□□□ 0.56
Lmcd1Q8VEE1 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Lmcd1Q8VEE1 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Lmcd1Q8VEE1 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Lmcd1Q8VEE1 Gm37820-201ENSMUST00000194021 2147 ntBASIC18.52■□□□□ 0.56
Lmcd1Q8VEE1 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Lmcd1Q8VEE1 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Lmcd1Q8VEE1 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Lmcd1Q8VEE1 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Lmcd1Q8VEE1 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Lmcd1Q8VEE1 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Lmcd1Q8VEE1 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Lmcd1Q8VEE1 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Lmcd1Q8VEE1 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lmcd1Q8VEE1 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lmcd1Q8VEE1 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Lmcd1Q8VEE1 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Lmcd1Q8VEE1 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lmcd1Q8VEE1 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC18.51■□□□□ 0.55
Lmcd1Q8VEE1 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC18.51■□□□□ 0.55
Lmcd1Q8VEE1 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Lmcd1Q8VEE1 Gm7063-201ENSMUST00000186840 981 ntBASIC18.51■□□□□ 0.55
Lmcd1Q8VEE1 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC18.51■□□□□ 0.55
Lmcd1Q8VEE1 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Lmcd1Q8VEE1 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lmcd1Q8VEE1 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lmcd1Q8VEE1 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Lmcd1Q8VEE1 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Lmcd1Q8VEE1 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC18.51■□□□□ 0.55
Lmcd1Q8VEE1 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lmcd1Q8VEE1 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
Lmcd1Q8VEE1 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Lmcd1Q8VEE1 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC18.51■□□□□ 0.55
Lmcd1Q8VEE1 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lmcd1Q8VEE1 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lmcd1Q8VEE1 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Lmcd1Q8VEE1 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Lmcd1Q8VEE1 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Lmcd1Q8VEE1 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Lmcd1Q8VEE1 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Lmcd1Q8VEE1 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC18.5■□□□□ 0.55
Lmcd1Q8VEE1 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Lmcd1Q8VEE1 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Lmcd1Q8VEE1 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC18.5■□□□□ 0.55
Lmcd1Q8VEE1 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC18.5■□□□□ 0.55
Lmcd1Q8VEE1 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Lmcd1Q8VEE1 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Lmcd1Q8VEE1 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Lmcd1Q8VEE1 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lmcd1Q8VEE1 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lmcd1Q8VEE1 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lmcd1Q8VEE1 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Lmcd1Q8VEE1 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Lmcd1Q8VEE1 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Lmcd1Q8VEE1 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lmcd1Q8VEE1 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lmcd1Q8VEE1 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Lmcd1Q8VEE1 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lmcd1Q8VEE1 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.48■□□□□ 0.55
Lmcd1Q8VEE1 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Lmcd1Q8VEE1 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Lmcd1Q8VEE1 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Lmcd1Q8VEE1 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Lmcd1Q8VEE1 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC18.48■□□□□ 0.55
Lmcd1Q8VEE1 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
Lmcd1Q8VEE1 AC138767.1-201ENSMUST00000222661 415 ntBASIC18.48■□□□□ 0.55
Lmcd1Q8VEE1 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Lmcd1Q8VEE1 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Lmcd1Q8VEE1 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Lmcd1Q8VEE1 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Lmcd1Q8VEE1 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.48■□□□□ 0.55
Lmcd1Q8VEE1 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Lmcd1Q8VEE1 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Lmcd1Q8VEE1 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Lmcd1Q8VEE1 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Lmcd1Q8VEE1 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.47■□□□□ 0.55
Lmcd1Q8VEE1 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Lmcd1Q8VEE1 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Lmcd1Q8VEE1 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Lmcd1Q8VEE1 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Lmcd1Q8VEE1 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Lmcd1Q8VEE1 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Lmcd1Q8VEE1 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Lmcd1Q8VEE1 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC18.47■□□□□ 0.55
Lmcd1Q8VEE1 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
Lmcd1Q8VEE1 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC18.47■□□□□ 0.55
Lmcd1Q8VEE1 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Lmcd1Q8VEE1 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC18.47■□□□□ 0.55
Lmcd1Q8VEE1 Gm29791-202ENSMUST00000207888 369 ntBASIC18.47■□□□□ 0.55
Lmcd1Q8VEE1 AC154621.1-201ENSMUST00000226155 1119 ntBASIC18.47■□□□□ 0.55
Lmcd1Q8VEE1 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Lmcd1Q8VEE1 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Lmcd1Q8VEE1 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms