Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Tgds-204ENSMUST00000228543 1594 ntBASIC16.45■□□□□ 0.22
Ndc1Q8VCB1 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Ndc1Q8VCB1 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ndc1Q8VCB1 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ndc1Q8VCB1 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ndc1Q8VCB1 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Ndc1Q8VCB1 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ndc1Q8VCB1 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Ndc1Q8VCB1 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ndc1Q8VCB1 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Ndc1Q8VCB1 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ndc1Q8VCB1 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Ndc1Q8VCB1 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC16.44■□□□□ 0.22
Ndc1Q8VCB1 Gm12085-201ENSMUST00000119263 940 ntBASIC16.44■□□□□ 0.22
Ndc1Q8VCB1 Gm11539-201ENSMUST00000119837 557 ntBASIC16.44■□□□□ 0.22
Ndc1Q8VCB1 Gm13436-201ENSMUST00000120418 567 ntBASIC16.44■□□□□ 0.22
Ndc1Q8VCB1 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ndc1Q8VCB1 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ndc1Q8VCB1 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ndc1Q8VCB1 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ndc1Q8VCB1 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ndc1Q8VCB1 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ndc1Q8VCB1 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ndc1Q8VCB1 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC16.44■□□□□ 0.22
Ndc1Q8VCB1 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ndc1Q8VCB1 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ndc1Q8VCB1 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ndc1Q8VCB1 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ndc1Q8VCB1 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ndc1Q8VCB1 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ndc1Q8VCB1 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ndc1Q8VCB1 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ndc1Q8VCB1 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ndc1Q8VCB1 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ndc1Q8VCB1 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ndc1Q8VCB1 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ndc1Q8VCB1 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ndc1Q8VCB1 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Ndc1Q8VCB1 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ndc1Q8VCB1 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Ndc1Q8VCB1 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ndc1Q8VCB1 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
Ndc1Q8VCB1 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC16.43■□□□□ 0.22
Ndc1Q8VCB1 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC16.43■□□□□ 0.22
Ndc1Q8VCB1 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ndc1Q8VCB1 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ndc1Q8VCB1 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ndc1Q8VCB1 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ndc1Q8VCB1 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ndc1Q8VCB1 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC16.43■□□□□ 0.22
Ndc1Q8VCB1 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ndc1Q8VCB1 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ndc1Q8VCB1 Gm8668-201ENSMUST00000120559 1447 ntBASIC16.43■□□□□ 0.22
Ndc1Q8VCB1 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ndc1Q8VCB1 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC16.43■□□□□ 0.22
Ndc1Q8VCB1 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ndc1Q8VCB1 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ndc1Q8VCB1 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ndc1Q8VCB1 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ndc1Q8VCB1 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ndc1Q8VCB1 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ndc1Q8VCB1 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Ndc1Q8VCB1 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ndc1Q8VCB1 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ndc1Q8VCB1 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ndc1Q8VCB1 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ndc1Q8VCB1 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ndc1Q8VCB1 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ndc1Q8VCB1 Gm13559-201ENSMUST00000120476 863 ntBASIC16.42■□□□□ 0.22
Ndc1Q8VCB1 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ndc1Q8VCB1 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC16.42■□□□□ 0.22
Ndc1Q8VCB1 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ndc1Q8VCB1 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ndc1Q8VCB1 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ndc1Q8VCB1 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ndc1Q8VCB1 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Ndc1Q8VCB1 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Ndc1Q8VCB1 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ndc1Q8VCB1 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ndc1Q8VCB1 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ndc1Q8VCB1 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Ndc1Q8VCB1 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ndc1Q8VCB1 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC16.41■□□□□ 0.22
Ndc1Q8VCB1 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ndc1Q8VCB1 Gm10231-201ENSMUST00000181584 441 ntBASIC16.41■□□□□ 0.22
Ndc1Q8VCB1 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ndc1Q8VCB1 Gm9694-201ENSMUST00000193347 1189 ntBASIC16.41■□□□□ 0.22
Ndc1Q8VCB1 Gm10175-202ENSMUST00000208752 441 ntBASIC16.41■□□□□ 0.22
Ndc1Q8VCB1 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ndc1Q8VCB1 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ndc1Q8VCB1 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ndc1Q8VCB1 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ndc1Q8VCB1 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ndc1Q8VCB1 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ndc1Q8VCB1 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ndc1Q8VCB1 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Ndc1Q8VCB1 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC16.4■□□□□ 0.22
Ndc1Q8VCB1 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ndc1Q8VCB1 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ndc1Q8VCB1 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms