Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Lsm1Q8VC85 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lsm1Q8VC85 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Lsm1Q8VC85 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC16.71■□□□□ 0.27
Lsm1Q8VC85 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Lsm1Q8VC85 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Lsm1Q8VC85 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Lsm1Q8VC85 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lsm1Q8VC85 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Lsm1Q8VC85 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
Lsm1Q8VC85 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
Lsm1Q8VC85 Dio3-201ENSMUST00000097228 1449 ntBASIC16.7■□□□□ 0.26
Lsm1Q8VC85 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Lsm1Q8VC85 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Lsm1Q8VC85 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lsm1Q8VC85 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Lsm1Q8VC85 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC16.7■□□□□ 0.26
Lsm1Q8VC85 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lsm1Q8VC85 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Lsm1Q8VC85 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lsm1Q8VC85 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC16.7■□□□□ 0.26
Lsm1Q8VC85 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lsm1Q8VC85 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Lsm1Q8VC85 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Lsm1Q8VC85 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC16.7■□□□□ 0.26
Lsm1Q8VC85 Gm10138-203ENSMUST00000206952 366 ntBASIC16.7■□□□□ 0.26
Lsm1Q8VC85 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Lsm1Q8VC85 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC16.7■□□□□ 0.26
Lsm1Q8VC85 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lsm1Q8VC85 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Lsm1Q8VC85 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Lsm1Q8VC85 Gm45244-201ENSMUST00000211328 2200 ntBASIC16.7■□□□□ 0.26
Lsm1Q8VC85 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lsm1Q8VC85 AC122335.2-201ENSMUST00000213901 6181 ntBASIC16.7■□□□□ 0.26
Lsm1Q8VC85 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Lsm1Q8VC85 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Lsm1Q8VC85 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lsm1Q8VC85 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lsm1Q8VC85 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lsm1Q8VC85 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Lsm1Q8VC85 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lsm1Q8VC85 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lsm1Q8VC85 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Lsm1Q8VC85 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC16.69■□□□□ 0.26
Lsm1Q8VC85 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC16.69■□□□□ 0.26
Lsm1Q8VC85 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Lsm1Q8VC85 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lsm1Q8VC85 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Lsm1Q8VC85 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Lsm1Q8VC85 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lsm1Q8VC85 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lsm1Q8VC85 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lsm1Q8VC85 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lsm1Q8VC85 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Lsm1Q8VC85 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Lsm1Q8VC85 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC16.69■□□□□ 0.26
Lsm1Q8VC85 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lsm1Q8VC85 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lsm1Q8VC85 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Lsm1Q8VC85 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lsm1Q8VC85 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lsm1Q8VC85 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lsm1Q8VC85 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC16.68■□□□□ 0.26
Lsm1Q8VC85 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lsm1Q8VC85 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lsm1Q8VC85 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Lsm1Q8VC85 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Lsm1Q8VC85 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lsm1Q8VC85 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lsm1Q8VC85 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lsm1Q8VC85 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC16.68■□□□□ 0.26
Lsm1Q8VC85 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lsm1Q8VC85 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Lsm1Q8VC85 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC16.67■□□□□ 0.26
Lsm1Q8VC85 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Lsm1Q8VC85 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Lsm1Q8VC85 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Lsm1Q8VC85 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Lsm1Q8VC85 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Lsm1Q8VC85 Gm15375-201ENSMUST00000119510 849 ntBASIC16.67■□□□□ 0.26
Lsm1Q8VC85 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC16.67■□□□□ 0.26
Lsm1Q8VC85 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Lsm1Q8VC85 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Lsm1Q8VC85 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Lsm1Q8VC85 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.67■□□□□ 0.26
Lsm1Q8VC85 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Lsm1Q8VC85 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Lsm1Q8VC85 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Lsm1Q8VC85 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Lsm1Q8VC85 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Lsm1Q8VC85 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Lsm1Q8VC85 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC16.66■□□□□ 0.26
Lsm1Q8VC85 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC16.66■□□□□ 0.26
Lsm1Q8VC85 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lsm1Q8VC85 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Lsm1Q8VC85 Gm3807-201ENSMUST00000193520 1168 ntBASIC16.66■□□□□ 0.26
Lsm1Q8VC85 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC16.66■□□□□ 0.26
Lsm1Q8VC85 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Lsm1Q8VC85 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC16.66■□□□□ 0.26
Lsm1Q8VC85 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms