Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC16.8■□□□□ 0.28
Rnf8Q8VC56 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf8Q8VC56 Gm44549-201ENSMUST00000208351 577 ntBASIC16.8■□□□□ 0.28
Rnf8Q8VC56 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC16.8■□□□□ 0.28
Rnf8Q8VC56 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC16.8■□□□□ 0.28
Rnf8Q8VC56 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf8Q8VC56 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf8Q8VC56 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf8Q8VC56 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Rnf8Q8VC56 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC16.8■□□□□ 0.28
Rnf8Q8VC56 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Rnf8Q8VC56 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf8Q8VC56 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf8Q8VC56 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf8Q8VC56 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf8Q8VC56 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf8Q8VC56 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf8Q8VC56 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf8Q8VC56 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf8Q8VC56 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf8Q8VC56 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Rnf8Q8VC56 Gm12669-201ENSMUST00000122162 1009 ntBASIC16.79■□□□□ 0.28
Rnf8Q8VC56 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC16.79■□□□□ 0.28
Rnf8Q8VC56 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf8Q8VC56 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf8Q8VC56 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Rnf8Q8VC56 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf8Q8VC56 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Rnf8Q8VC56 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf8Q8VC56 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf8Q8VC56 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf8Q8VC56 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Rnf8Q8VC56 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Rnf8Q8VC56 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
Rnf8Q8VC56 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC16.78■□□□□ 0.28
Rnf8Q8VC56 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf8Q8VC56 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf8Q8VC56 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Rnf8Q8VC56 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf8Q8VC56 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf8Q8VC56 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf8Q8VC56 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf8Q8VC56 Gm20760-201ENSMUST00000179197 648 ntBASIC16.78■□□□□ 0.28
Rnf8Q8VC56 Gm44672-201ENSMUST00000206944 1098 ntBASIC16.78■□□□□ 0.28
Rnf8Q8VC56 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf8Q8VC56 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf8Q8VC56 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf8Q8VC56 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf8Q8VC56 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf8Q8VC56 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf8Q8VC56 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf8Q8VC56 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf8Q8VC56 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf8Q8VC56 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.77■□□□□ 0.28
Rnf8Q8VC56 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rnf8Q8VC56 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rnf8Q8VC56 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Rnf8Q8VC56 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rnf8Q8VC56 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Rnf8Q8VC56 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rnf8Q8VC56 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rnf8Q8VC56 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Rnf8Q8VC56 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC16.77■□□□□ 0.28
Rnf8Q8VC56 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Rnf8Q8VC56 AC140264.2-202ENSMUST00000218746 817 ntBASIC16.77■□□□□ 0.28
Rnf8Q8VC56 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Rnf8Q8VC56 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC16.77■□□□□ 0.28
Rnf8Q8VC56 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rnf8Q8VC56 Gm45412-201ENSMUST00000210217 2275 ntBASIC16.77■□□□□ 0.27
Rnf8Q8VC56 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rnf8Q8VC56 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Rnf8Q8VC56 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC16.77■□□□□ 0.27
Rnf8Q8VC56 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Rnf8Q8VC56 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rnf8Q8VC56 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Rnf8Q8VC56 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rnf8Q8VC56 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rnf8Q8VC56 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Rnf8Q8VC56 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Rnf8Q8VC56 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC16.76■□□□□ 0.27
Rnf8Q8VC56 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rnf8Q8VC56 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC16.76■□□□□ 0.27
Rnf8Q8VC56 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rnf8Q8VC56 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC16.76■□□□□ 0.27
Rnf8Q8VC56 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rnf8Q8VC56 Gm2559-201ENSMUST00000201323 363 ntBASIC16.76■□□□□ 0.27
Rnf8Q8VC56 Gm20049-201ENSMUST00000219950 730 ntBASIC16.76■□□□□ 0.27
Rnf8Q8VC56 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rnf8Q8VC56 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.76■□□□□ 0.27
Rnf8Q8VC56 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Rnf8Q8VC56 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Rnf8Q8VC56 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rnf8Q8VC56 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rnf8Q8VC56 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rnf8Q8VC56 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Rnf8Q8VC56 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rnf8Q8VC56 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rnf8Q8VC56 Gm43294-201ENSMUST00000202850 2490 ntBASIC16.75■□□□□ 0.27
Rnf8Q8VC56 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rnf8Q8VC56 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 59.1 ms