Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ccdc9Q8VC31 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC21■□□□□ 0.95
Ccdc9Q8VC31 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ccdc9Q8VC31 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Ccdc9Q8VC31 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Ccdc9Q8VC31 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
Ccdc9Q8VC31 Golgb1-201ENSMUST00000023534 498 ntBASIC21■□□□□ 0.95
Ccdc9Q8VC31 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ccdc9Q8VC31 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ccdc9Q8VC31 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Ccdc9Q8VC31 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ccdc9Q8VC31 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
Ccdc9Q8VC31 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc9Q8VC31 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC20.99■□□□□ 0.95
Ccdc9Q8VC31 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc9Q8VC31 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc9Q8VC31 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC20.99■□□□□ 0.95
Ccdc9Q8VC31 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc9Q8VC31 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc9Q8VC31 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc9Q8VC31 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc9Q8VC31 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Ccdc9Q8VC31 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Ccdc9Q8VC31 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc9Q8VC31 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc9Q8VC31 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc9Q8VC31 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc9Q8VC31 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc9Q8VC31 Gm43759-201ENSMUST00000196925 1261 ntBASIC20.98■□□□□ 0.95
Ccdc9Q8VC31 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC20.98■□□□□ 0.95
Ccdc9Q8VC31 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC20.98■□□□□ 0.95
Ccdc9Q8VC31 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc9Q8VC31 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc9Q8VC31 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc9Q8VC31 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc9Q8VC31 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Ccdc9Q8VC31 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ccdc9Q8VC31 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
Ccdc9Q8VC31 Zkscan3-208ENSMUST00000224820 5398 ntBASIC20.97■□□□□ 0.95
Ccdc9Q8VC31 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ccdc9Q8VC31 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ccdc9Q8VC31 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ccdc9Q8VC31 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ccdc9Q8VC31 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC20.97■□□□□ 0.95
Ccdc9Q8VC31 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Ccdc9Q8VC31 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC20.97■□□□□ 0.95
Ccdc9Q8VC31 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC20.97■□□□□ 0.95
Ccdc9Q8VC31 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ccdc9Q8VC31 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ccdc9Q8VC31 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC20.97■□□□□ 0.95
Ccdc9Q8VC31 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC20.96■□□□□ 0.95
Ccdc9Q8VC31 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc9Q8VC31 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc9Q8VC31 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc9Q8VC31 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc9Q8VC31 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc9Q8VC31 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc9Q8VC31 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc9Q8VC31 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc9Q8VC31 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc9Q8VC31 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc9Q8VC31 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Ccdc9Q8VC31 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ccdc9Q8VC31 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ccdc9Q8VC31 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ccdc9Q8VC31 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC20.95■□□□□ 0.94
Ccdc9Q8VC31 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Ccdc9Q8VC31 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ccdc9Q8VC31 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
Ccdc9Q8VC31 Gm8770-201ENSMUST00000121113 1109 ntBASIC20.95■□□□□ 0.94
Ccdc9Q8VC31 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC20.95■□□□□ 0.94
Ccdc9Q8VC31 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Ccdc9Q8VC31 Gm9847-201ENSMUST00000052528 599 ntBASIC20.95■□□□□ 0.94
Ccdc9Q8VC31 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ccdc9Q8VC31 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ccdc9Q8VC31 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC20.95■□□□□ 0.94
Ccdc9Q8VC31 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ccdc9Q8VC31 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ccdc9Q8VC31 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ccdc9Q8VC31 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ccdc9Q8VC31 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ccdc9Q8VC31 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC20.94■□□□□ 0.94
Ccdc9Q8VC31 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ccdc9Q8VC31 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ccdc9Q8VC31 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Ccdc9Q8VC31 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC20.94■□□□□ 0.94
Ccdc9Q8VC31 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ccdc9Q8VC31 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ccdc9Q8VC31 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ccdc9Q8VC31 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Ccdc9Q8VC31 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ccdc9Q8VC31 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ccdc9Q8VC31 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ccdc9Q8VC31 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Ccdc9Q8VC31 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ccdc9Q8VC31 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ccdc9Q8VC31 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ccdc9Q8VC31 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ccdc9Q8VC31 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ccdc9Q8VC31 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms