Protein–RNA interactions for Protein: Q8VBZ3

Clptm1, Cleft lip and palate transmembrane protein 1 homolog, mousemouse

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clptm1Q8VBZ3 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Clptm1Q8VBZ3 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Clptm1Q8VBZ3 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Clptm1Q8VBZ3 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.79■□□□□ 0.44
Clptm1Q8VBZ3 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
Clptm1Q8VBZ3 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.79■□□□□ 0.44
Clptm1Q8VBZ3 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Clptm1Q8VBZ3 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Clptm1Q8VBZ3 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Clptm1Q8VBZ3 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Clptm1Q8VBZ3 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Clptm1Q8VBZ3 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clptm1Q8VBZ3 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clptm1Q8VBZ3 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC17.78■□□□□ 0.44
Clptm1Q8VBZ3 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
Clptm1Q8VBZ3 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Clptm1Q8VBZ3 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clptm1Q8VBZ3 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clptm1Q8VBZ3 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clptm1Q8VBZ3 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clptm1Q8VBZ3 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Clptm1Q8VBZ3 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Clptm1Q8VBZ3 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Clptm1Q8VBZ3 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Clptm1Q8VBZ3 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Clptm1Q8VBZ3 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.77■□□□□ 0.44
Clptm1Q8VBZ3 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Clptm1Q8VBZ3 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Clptm1Q8VBZ3 Gm45412-201ENSMUST00000210217 2275 ntBASIC17.77■□□□□ 0.44
Clptm1Q8VBZ3 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC17.77■□□□□ 0.44
Clptm1Q8VBZ3 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC17.77■□□□□ 0.44
Clptm1Q8VBZ3 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Clptm1Q8VBZ3 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC17.77■□□□□ 0.44
Clptm1Q8VBZ3 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Clptm1Q8VBZ3 Gm9987-201ENSMUST00000069768 567 ntBASIC17.77■□□□□ 0.44
Clptm1Q8VBZ3 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
Clptm1Q8VBZ3 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Clptm1Q8VBZ3 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Clptm1Q8VBZ3 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Clptm1Q8VBZ3 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Clptm1Q8VBZ3 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Clptm1Q8VBZ3 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Clptm1Q8VBZ3 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Clptm1Q8VBZ3 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Clptm1Q8VBZ3 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Clptm1Q8VBZ3 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Clptm1Q8VBZ3 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Clptm1Q8VBZ3 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Clptm1Q8VBZ3 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
Clptm1Q8VBZ3 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Clptm1Q8VBZ3 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Clptm1Q8VBZ3 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Clptm1Q8VBZ3 AC153881.2-201ENSMUST00000214877 204 ntBASIC17.76■□□□□ 0.43
Clptm1Q8VBZ3 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Clptm1Q8VBZ3 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.76■□□□□ 0.43
Clptm1Q8VBZ3 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Clptm1Q8VBZ3 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Clptm1Q8VBZ3 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Clptm1Q8VBZ3 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Clptm1Q8VBZ3 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Clptm1Q8VBZ3 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.75■□□□□ 0.43
Clptm1Q8VBZ3 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.75■□□□□ 0.43
Clptm1Q8VBZ3 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Clptm1Q8VBZ3 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Clptm1Q8VBZ3 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Clptm1Q8VBZ3 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Clptm1Q8VBZ3 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
Clptm1Q8VBZ3 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Clptm1Q8VBZ3 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Clptm1Q8VBZ3 AC175538.1-201ENSMUST00000225343 1269 ntBASIC17.75■□□□□ 0.43
Clptm1Q8VBZ3 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Clptm1Q8VBZ3 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Clptm1Q8VBZ3 Gm5417-201ENSMUST00000079706 384 ntBASIC17.75■□□□□ 0.43
Clptm1Q8VBZ3 Zfp783-201ENSMUST00000095946 670 ntBASIC17.75■□□□□ 0.43
Clptm1Q8VBZ3 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Clptm1Q8VBZ3 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Clptm1Q8VBZ3 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Clptm1Q8VBZ3 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Clptm1Q8VBZ3 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Clptm1Q8VBZ3 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Clptm1Q8VBZ3 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.75■□□□□ 0.43
Clptm1Q8VBZ3 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Clptm1Q8VBZ3 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Clptm1Q8VBZ3 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Clptm1Q8VBZ3 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Clptm1Q8VBZ3 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Clptm1Q8VBZ3 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Clptm1Q8VBZ3 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Clptm1Q8VBZ3 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Clptm1Q8VBZ3 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Clptm1Q8VBZ3 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC17.74■□□□□ 0.43
Clptm1Q8VBZ3 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Clptm1Q8VBZ3 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Clptm1Q8VBZ3 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Clptm1Q8VBZ3 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Clptm1Q8VBZ3 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Clptm1Q8VBZ3 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Clptm1Q8VBZ3 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Clptm1Q8VBZ3 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Clptm1Q8VBZ3 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms