Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nup35Q8R4R6 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nup35Q8R4R6 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC14.25□□□□□ -0.13
Nup35Q8R4R6 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Nup35Q8R4R6 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC14.25□□□□□ -0.13
Nup35Q8R4R6 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC14.25□□□□□ -0.13
Nup35Q8R4R6 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nup35Q8R4R6 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nup35Q8R4R6 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Nup35Q8R4R6 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Nup35Q8R4R6 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nup35Q8R4R6 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Nup35Q8R4R6 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Nup35Q8R4R6 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nup35Q8R4R6 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nup35Q8R4R6 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Nup35Q8R4R6 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Nup35Q8R4R6 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Nup35Q8R4R6 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nup35Q8R4R6 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nup35Q8R4R6 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nup35Q8R4R6 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nup35Q8R4R6 Gm10129-202ENSMUST00000193100 1316 ntBASIC14.24□□□□□ -0.13
Nup35Q8R4R6 Nespas-201ENSMUST00000143738 1083 ntBASIC14.24□□□□□ -0.13
Nup35Q8R4R6 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nup35Q8R4R6 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Nup35Q8R4R6 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC14.24□□□□□ -0.13
Nup35Q8R4R6 Gm29791-202ENSMUST00000207888 369 ntBASIC14.24□□□□□ -0.13
Nup35Q8R4R6 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Nup35Q8R4R6 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Nup35Q8R4R6 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC14.24□□□□□ -0.13
Nup35Q8R4R6 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nup35Q8R4R6 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Nup35Q8R4R6 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nup35Q8R4R6 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nup35Q8R4R6 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nup35Q8R4R6 Gm37166-201ENSMUST00000195473 2474 ntBASIC14.23□□□□□ -0.13
Nup35Q8R4R6 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nup35Q8R4R6 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nup35Q8R4R6 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nup35Q8R4R6 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nup35Q8R4R6 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nup35Q8R4R6 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nup35Q8R4R6 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nup35Q8R4R6 Gm21168-201ENSMUST00000199646 1096 ntBASIC14.23□□□□□ -0.13
Nup35Q8R4R6 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC14.23□□□□□ -0.13
Nup35Q8R4R6 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nup35Q8R4R6 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nup35Q8R4R6 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nup35Q8R4R6 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nup35Q8R4R6 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nup35Q8R4R6 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nup35Q8R4R6 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nup35Q8R4R6 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nup35Q8R4R6 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nup35Q8R4R6 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nup35Q8R4R6 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nup35Q8R4R6 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nup35Q8R4R6 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Nup35Q8R4R6 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nup35Q8R4R6 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nup35Q8R4R6 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Nup35Q8R4R6 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Nup35Q8R4R6 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nup35Q8R4R6 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nup35Q8R4R6 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nup35Q8R4R6 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nup35Q8R4R6 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC14.22□□□□□ -0.13
Nup35Q8R4R6 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nup35Q8R4R6 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Nup35Q8R4R6 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Nup35Q8R4R6 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nup35Q8R4R6 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Nup35Q8R4R6 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC14.22□□□□□ -0.13
Nup35Q8R4R6 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC14.22□□□□□ -0.13
Nup35Q8R4R6 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nup35Q8R4R6 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nup35Q8R4R6 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Nup35Q8R4R6 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Nup35Q8R4R6 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nup35Q8R4R6 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nup35Q8R4R6 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Nup35Q8R4R6 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nup35Q8R4R6 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nup35Q8R4R6 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Nup35Q8R4R6 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nup35Q8R4R6 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nup35Q8R4R6 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nup35Q8R4R6 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Nup35Q8R4R6 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nup35Q8R4R6 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nup35Q8R4R6 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nup35Q8R4R6 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nup35Q8R4R6 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC14.21□□□□□ -0.13
Nup35Q8R4R6 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Nup35Q8R4R6 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nup35Q8R4R6 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC14.21□□□□□ -0.13
Nup35Q8R4R6 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC14.21□□□□□ -0.13
Nup35Q8R4R6 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Nup35Q8R4R6 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms