Protein–RNA interactions for Protein: Q8R323

Rfc3, Replication factor C subunit 3, mousemouse

Known RBP Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc3Q8R323 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rfc3Q8R323 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Rfc3Q8R323 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rfc3Q8R323 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rfc3Q8R323 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Rfc3Q8R323 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Rfc3Q8R323 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Rfc3Q8R323 AC166341.7-201ENSMUST00000221698 126 ntBASIC16.07■□□□□ 0.16
Rfc3Q8R323 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rfc3Q8R323 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rfc3Q8R323 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Rfc3Q8R323 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rfc3Q8R323 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Rfc3Q8R323 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rfc3Q8R323 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rfc3Q8R323 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rfc3Q8R323 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rfc3Q8R323 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rfc3Q8R323 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Rfc3Q8R323 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Rfc3Q8R323 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rfc3Q8R323 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rfc3Q8R323 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC16.06■□□□□ 0.16
Rfc3Q8R323 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC16.06■□□□□ 0.16
Rfc3Q8R323 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC16.06■□□□□ 0.16
Rfc3Q8R323 Gm7712-202ENSMUST00000222331 1510 ntBASIC16.06■□□□□ 0.16
Rfc3Q8R323 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rfc3Q8R323 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Rfc3Q8R323 AC156016.1-201ENSMUST00000227190 1035 ntBASIC16.06■□□□□ 0.16
Rfc3Q8R323 Otx2os1-204ENSMUST00000227221 751 ntBASIC16.06■□□□□ 0.16
Rfc3Q8R323 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Rfc3Q8R323 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rfc3Q8R323 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rfc3Q8R323 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rfc3Q8R323 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rfc3Q8R323 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rfc3Q8R323 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rfc3Q8R323 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rfc3Q8R323 Gm6598-201ENSMUST00000202719 2615 ntBASIC16.05■□□□□ 0.16
Rfc3Q8R323 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rfc3Q8R323 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rfc3Q8R323 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
Rfc3Q8R323 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rfc3Q8R323 Mir2861-201ENSMUST00000175539 82 ntBASIC16.05■□□□□ 0.16
Rfc3Q8R323 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rfc3Q8R323 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rfc3Q8R323 Gm9987-201ENSMUST00000069768 567 ntBASIC16.05■□□□□ 0.16
Rfc3Q8R323 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rfc3Q8R323 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rfc3Q8R323 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rfc3Q8R323 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
Rfc3Q8R323 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rfc3Q8R323 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rfc3Q8R323 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
Rfc3Q8R323 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC16.05■□□□□ 0.16
Rfc3Q8R323 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Rfc3Q8R323 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
Rfc3Q8R323 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rfc3Q8R323 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rfc3Q8R323 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rfc3Q8R323 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Rfc3Q8R323 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rfc3Q8R323 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rfc3Q8R323 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rfc3Q8R323 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rfc3Q8R323 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rfc3Q8R323 Gm43799-201ENSMUST00000201845 579 ntBASIC16.04■□□□□ 0.16
Rfc3Q8R323 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC16.04■□□□□ 0.16
Rfc3Q8R323 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rfc3Q8R323 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rfc3Q8R323 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rfc3Q8R323 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rfc3Q8R323 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Rfc3Q8R323 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.03■□□□□ 0.16
Rfc3Q8R323 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Rfc3Q8R323 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rfc3Q8R323 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rfc3Q8R323 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Rfc3Q8R323 Gm29994-201ENSMUST00000195495 1193 ntBASIC16.03■□□□□ 0.16
Rfc3Q8R323 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Rfc3Q8R323 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC16.03■□□□□ 0.16
Rfc3Q8R323 Gm30025-201ENSMUST00000218555 728 ntBASIC16.03■□□□□ 0.16
Rfc3Q8R323 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rfc3Q8R323 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rfc3Q8R323 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rfc3Q8R323 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Rfc3Q8R323 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rfc3Q8R323 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Rfc3Q8R323 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rfc3Q8R323 AC123834.2-201ENSMUST00000224038 2340 ntBASIC16.02■□□□□ 0.16
Rfc3Q8R323 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rfc3Q8R323 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rfc3Q8R323 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rfc3Q8R323 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Rfc3Q8R323 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
Rfc3Q8R323 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC16.02■□□□□ 0.16
Rfc3Q8R323 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rfc3Q8R323 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC16.02■□□□□ 0.16
Rfc3Q8R323 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rfc3Q8R323 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC16.02■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 133.5 ms