Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Atf7Q8R0S1 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Atf7Q8R0S1 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
Atf7Q8R0S1 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Atf7Q8R0S1 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Atf7Q8R0S1 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Atf7Q8R0S1 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Atf7Q8R0S1 Gm19439-201ENSMUST00000198195 2273 ntBASIC20.57■□□□□ 0.88
Atf7Q8R0S1 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC20.57■□□□□ 0.88
Atf7Q8R0S1 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Atf7Q8R0S1 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Atf7Q8R0S1 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Atf7Q8R0S1 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Atf7Q8R0S1 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Atf7Q8R0S1 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Atf7Q8R0S1 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Atf7Q8R0S1 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Atf7Q8R0S1 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Atf7Q8R0S1 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Atf7Q8R0S1 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Atf7Q8R0S1 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Atf7Q8R0S1 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC20.56■□□□□ 0.88
Atf7Q8R0S1 Gm10517-202ENSMUST00000192970 758 ntBASIC20.56■□□□□ 0.88
Atf7Q8R0S1 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Atf7Q8R0S1 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
Atf7Q8R0S1 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Atf7Q8R0S1 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Atf7Q8R0S1 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Atf7Q8R0S1 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Atf7Q8R0S1 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Atf7Q8R0S1 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Atf7Q8R0S1 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC20.56■□□□□ 0.88
Atf7Q8R0S1 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Atf7Q8R0S1 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Atf7Q8R0S1 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Atf7Q8R0S1 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Atf7Q8R0S1 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Atf7Q8R0S1 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC20.55■□□□□ 0.88
Atf7Q8R0S1 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Atf7Q8R0S1 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
Atf7Q8R0S1 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC20.55■□□□□ 0.88
Atf7Q8R0S1 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Atf7Q8R0S1 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC20.55■□□□□ 0.88
Atf7Q8R0S1 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC20.55■□□□□ 0.88
Atf7Q8R0S1 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Atf7Q8R0S1 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Atf7Q8R0S1 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Atf7Q8R0S1 Gm10461-201ENSMUST00000202073 4786 ntBASIC20.54■□□□□ 0.88
Atf7Q8R0S1 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
Atf7Q8R0S1 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Atf7Q8R0S1 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Atf7Q8R0S1 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Atf7Q8R0S1 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Atf7Q8R0S1 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Atf7Q8R0S1 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC20.54■□□□□ 0.88
Atf7Q8R0S1 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Atf7Q8R0S1 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
Atf7Q8R0S1 AC124581.1-201ENSMUST00000225416 1399 ntBASIC20.54■□□□□ 0.88
Atf7Q8R0S1 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Atf7Q8R0S1 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Atf7Q8R0S1 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Atf7Q8R0S1 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Atf7Q8R0S1 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Atf7Q8R0S1 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Atf7Q8R0S1 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Atf7Q8R0S1 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Atf7Q8R0S1 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Atf7Q8R0S1 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Atf7Q8R0S1 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Atf7Q8R0S1 Gm43338-201ENSMUST00000198617 2223 ntBASIC20.53■□□□□ 0.88
Atf7Q8R0S1 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC20.53■□□□□ 0.88
Atf7Q8R0S1 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Atf7Q8R0S1 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Atf7Q8R0S1 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC20.53■□□□□ 0.88
Atf7Q8R0S1 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Atf7Q8R0S1 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Atf7Q8R0S1 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Atf7Q8R0S1 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Atf7Q8R0S1 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Atf7Q8R0S1 CT010444.2-201ENSMUST00000217877 1629 ntBASIC20.53■□□□□ 0.88
Atf7Q8R0S1 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Atf7Q8R0S1 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Atf7Q8R0S1 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Atf7Q8R0S1 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Atf7Q8R0S1 Gm15635-204ENSMUST00000208024 2539 ntBASIC20.52■□□□□ 0.88
Atf7Q8R0S1 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Atf7Q8R0S1 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC20.52■□□□□ 0.88
Atf7Q8R0S1 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Atf7Q8R0S1 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Atf7Q8R0S1 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
Atf7Q8R0S1 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC20.52■□□□□ 0.88
Atf7Q8R0S1 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Atf7Q8R0S1 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Atf7Q8R0S1 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Atf7Q8R0S1 Gm43294-201ENSMUST00000202850 2490 ntBASIC20.52■□□□□ 0.88
Atf7Q8R0S1 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Atf7Q8R0S1 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC20.52■□□□□ 0.87
Atf7Q8R0S1 AC121598.2-201ENSMUST00000228376 2325 ntBASIC20.52■□□□□ 0.87
Atf7Q8R0S1 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Atf7Q8R0S1 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms