Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Ddx54Q8K4L0 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Ddx54Q8K4L0 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Ddx54Q8K4L0 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC22.8■■□□□ 1.24
Ddx54Q8K4L0 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC22.79■■□□□ 1.24
Ddx54Q8K4L0 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC22.79■■□□□ 1.24
Ddx54Q8K4L0 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Ddx54Q8K4L0 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Ddx54Q8K4L0 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC22.79■■□□□ 1.24
Ddx54Q8K4L0 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC22.79■■□□□ 1.24
Ddx54Q8K4L0 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC22.79■■□□□ 1.24
Ddx54Q8K4L0 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Ddx54Q8K4L0 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Ddx54Q8K4L0 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC22.79■■□□□ 1.24
Ddx54Q8K4L0 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC22.79■■□□□ 1.24
Ddx54Q8K4L0 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC22.79■■□□□ 1.24
Ddx54Q8K4L0 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC22.78■■□□□ 1.24
Ddx54Q8K4L0 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Ddx54Q8K4L0 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Ddx54Q8K4L0 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC22.78■■□□□ 1.24
Ddx54Q8K4L0 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Ddx54Q8K4L0 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Ddx54Q8K4L0 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Ddx54Q8K4L0 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
Ddx54Q8K4L0 Gm15372-201ENSMUST00000120729 834 ntBASIC22.78■■□□□ 1.24
Ddx54Q8K4L0 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Ddx54Q8K4L0 Gm7063-201ENSMUST00000186840 981 ntBASIC22.78■■□□□ 1.24
Ddx54Q8K4L0 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Ddx54Q8K4L0 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Ddx54Q8K4L0 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC22.78■■□□□ 1.24
Ddx54Q8K4L0 Gm42922-201ENSMUST00000195887 2078 ntBASIC22.78■■□□□ 1.24
Ddx54Q8K4L0 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Ddx54Q8K4L0 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Ddx54Q8K4L0 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Ddx54Q8K4L0 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC22.77■■□□□ 1.24
Ddx54Q8K4L0 Zkscan4-202ENSMUST00000225845 1506 ntBASIC22.77■■□□□ 1.24
Ddx54Q8K4L0 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Ddx54Q8K4L0 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Ddx54Q8K4L0 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Ddx54Q8K4L0 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC22.77■■□□□ 1.24
Ddx54Q8K4L0 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC22.77■■□□□ 1.24
Ddx54Q8K4L0 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Ddx54Q8K4L0 Gm6376-201ENSMUST00000209407 580 ntBASIC22.77■■□□□ 1.24
Ddx54Q8K4L0 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Ddx54Q8K4L0 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Ddx54Q8K4L0 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Ddx54Q8K4L0 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC22.77■■□□□ 1.23
Ddx54Q8K4L0 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.23
Ddx54Q8K4L0 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Ddx54Q8K4L0 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Ddx54Q8K4L0 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Ddx54Q8K4L0 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Ddx54Q8K4L0 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Ddx54Q8K4L0 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Ddx54Q8K4L0 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC22.76■■□□□ 1.23
Ddx54Q8K4L0 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC22.76■■□□□ 1.23
Ddx54Q8K4L0 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Ddx54Q8K4L0 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Ddx54Q8K4L0 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Ddx54Q8K4L0 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC22.76■■□□□ 1.23
Ddx54Q8K4L0 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC22.76■■□□□ 1.23
Ddx54Q8K4L0 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Ddx54Q8K4L0 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Ddx54Q8K4L0 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Ddx54Q8K4L0 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC22.75■■□□□ 1.23
Ddx54Q8K4L0 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC22.75■■□□□ 1.23
Ddx54Q8K4L0 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Ddx54Q8K4L0 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Ddx54Q8K4L0 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Ddx54Q8K4L0 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Ddx54Q8K4L0 Gm27702-201ENSMUST00000184512 56 ntBASIC22.75■■□□□ 1.23
Ddx54Q8K4L0 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC22.75■■□□□ 1.23
Ddx54Q8K4L0 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Ddx54Q8K4L0 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Ddx54Q8K4L0 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Ddx54Q8K4L0 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Ddx54Q8K4L0 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Ddx54Q8K4L0 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Ddx54Q8K4L0 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC22.74■■□□□ 1.23
Ddx54Q8K4L0 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Ddx54Q8K4L0 Gm7862-201ENSMUST00000121461 292 ntBASIC22.74■■□□□ 1.23
Ddx54Q8K4L0 Gm6296-201ENSMUST00000222599 943 ntBASIC22.74■■□□□ 1.23
Ddx54Q8K4L0 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Ddx54Q8K4L0 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Ddx54Q8K4L0 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC22.73■■□□□ 1.23
Ddx54Q8K4L0 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Ddx54Q8K4L0 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC22.73■■□□□ 1.23
Ddx54Q8K4L0 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC22.73■■□□□ 1.23
Ddx54Q8K4L0 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Ddx54Q8K4L0 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC22.73■■□□□ 1.23
Ddx54Q8K4L0 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Ddx54Q8K4L0 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Ddx54Q8K4L0 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC22.73■■□□□ 1.23
Ddx54Q8K4L0 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC22.73■■□□□ 1.23
Ddx54Q8K4L0 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC22.73■■□□□ 1.23
Ddx54Q8K4L0 AC108846.1-201ENSMUST00000214531 513 ntBASIC22.73■■□□□ 1.23
Ddx54Q8K4L0 Gm5364-201ENSMUST00000216789 889 ntBASIC22.73■■□□□ 1.23
Ddx54Q8K4L0 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Ddx54Q8K4L0 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Ddx54Q8K4L0 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms