Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ebf4Q8K4J2 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ebf4Q8K4J2 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ebf4Q8K4J2 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Ebf4Q8K4J2 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ebf4Q8K4J2 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ebf4Q8K4J2 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Ebf4Q8K4J2 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Ebf4Q8K4J2 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ebf4Q8K4J2 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ebf4Q8K4J2 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ebf4Q8K4J2 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Ebf4Q8K4J2 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Ebf4Q8K4J2 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC15.92■□□□□ 0.14
Ebf4Q8K4J2 CT010467.1-202ENSMUST00000205406 714 ntBASIC15.92■□□□□ 0.14
Ebf4Q8K4J2 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ebf4Q8K4J2 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC15.92■□□□□ 0.14
Ebf4Q8K4J2 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Ebf4Q8K4J2 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ebf4Q8K4J2 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ebf4Q8K4J2 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ebf4Q8K4J2 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ebf4Q8K4J2 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Ebf4Q8K4J2 AC154231.1-201ENSMUST00000220564 2175 ntBASIC15.92■□□□□ 0.14
Ebf4Q8K4J2 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ebf4Q8K4J2 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC15.91■□□□□ 0.14
Ebf4Q8K4J2 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ebf4Q8K4J2 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Ebf4Q8K4J2 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Ebf4Q8K4J2 Gm8839-201ENSMUST00000121279 1645 ntBASIC15.91■□□□□ 0.14
Ebf4Q8K4J2 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC15.91■□□□□ 0.14
Ebf4Q8K4J2 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ebf4Q8K4J2 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC15.91■□□□□ 0.14
Ebf4Q8K4J2 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ebf4Q8K4J2 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ebf4Q8K4J2 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ebf4Q8K4J2 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Ebf4Q8K4J2 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
Ebf4Q8K4J2 Gm22325-201ENSMUST00000158904 308 ntBASIC15.91■□□□□ 0.14
Ebf4Q8K4J2 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC15.91■□□□□ 0.14
Ebf4Q8K4J2 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC15.91■□□□□ 0.14
Ebf4Q8K4J2 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ebf4Q8K4J2 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ebf4Q8K4J2 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ebf4Q8K4J2 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Ebf4Q8K4J2 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Ebf4Q8K4J2 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ebf4Q8K4J2 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ebf4Q8K4J2 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ebf4Q8K4J2 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ebf4Q8K4J2 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ebf4Q8K4J2 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ebf4Q8K4J2 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ebf4Q8K4J2 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ebf4Q8K4J2 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ebf4Q8K4J2 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Ebf4Q8K4J2 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ebf4Q8K4J2 AC160393.1-201ENSMUST00000218378 1279 ntBASIC15.9■□□□□ 0.14
Ebf4Q8K4J2 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ebf4Q8K4J2 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ebf4Q8K4J2 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Ebf4Q8K4J2 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Ebf4Q8K4J2 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ebf4Q8K4J2 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ebf4Q8K4J2 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ebf4Q8K4J2 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ebf4Q8K4J2 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ebf4Q8K4J2 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ebf4Q8K4J2 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ebf4Q8K4J2 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ebf4Q8K4J2 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ebf4Q8K4J2 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ebf4Q8K4J2 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC15.89■□□□□ 0.13
Ebf4Q8K4J2 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC15.89■□□□□ 0.13
Ebf4Q8K4J2 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC15.89■□□□□ 0.13
Ebf4Q8K4J2 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC15.89■□□□□ 0.13
Ebf4Q8K4J2 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ebf4Q8K4J2 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ebf4Q8K4J2 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ebf4Q8K4J2 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ebf4Q8K4J2 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Ebf4Q8K4J2 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Ebf4Q8K4J2 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ebf4Q8K4J2 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ebf4Q8K4J2 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Ebf4Q8K4J2 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC15.88■□□□□ 0.13
Ebf4Q8K4J2 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Ebf4Q8K4J2 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC15.88■□□□□ 0.13
Ebf4Q8K4J2 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC15.88■□□□□ 0.13
Ebf4Q8K4J2 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Ebf4Q8K4J2 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ebf4Q8K4J2 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ebf4Q8K4J2 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ebf4Q8K4J2 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ebf4Q8K4J2 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Ebf4Q8K4J2 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC15.88■□□□□ 0.13
Ebf4Q8K4J2 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ebf4Q8K4J2 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ebf4Q8K4J2 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ebf4Q8K4J2 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms