Protein–RNA interactions for Protein: Q8CJ61

Cmtm4, CKLF-like MARVEL transmembrane domain-containing protein 4, mousemouse

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cmtm4Q8CJ61 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Cmtm4Q8CJ61 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
Cmtm4Q8CJ61 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cmtm4Q8CJ61 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC15.07■□□□□ 0
Cmtm4Q8CJ61 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Cmtm4Q8CJ61 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC15.07■□□□□ 0
Cmtm4Q8CJ61 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC15.07■□□□□ 0
Cmtm4Q8CJ61 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Cmtm4Q8CJ61 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC15.06■□□□□ 0
Cmtm4Q8CJ61 Smad6-203ENSMUST00000179458 273 ntBASIC15.06■□□□□ 0
Cmtm4Q8CJ61 Gm27801-201ENSMUST00000184174 223 ntBASIC15.06■□□□□ 0
Cmtm4Q8CJ61 Gm43173-201ENSMUST00000202246 593 ntBASIC15.06■□□□□ 0
Cmtm4Q8CJ61 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC15.06■□□□□ 0
Cmtm4Q8CJ61 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC15.06■□□□□ 0
Cmtm4Q8CJ61 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cmtm4Q8CJ61 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cmtm4Q8CJ61 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC15.06■□□□□ 0
Cmtm4Q8CJ61 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC15.06■□□□□ 0
Cmtm4Q8CJ61 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Cmtm4Q8CJ61 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Cmtm4Q8CJ61 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC15.06■□□□□ 0
Cmtm4Q8CJ61 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Cmtm4Q8CJ61 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cmtm4Q8CJ61 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC15.06■□□□□ 0
Cmtm4Q8CJ61 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Cmtm4Q8CJ61 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cmtm4Q8CJ61 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Cmtm4Q8CJ61 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Cmtm4Q8CJ61 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Cmtm4Q8CJ61 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Cmtm4Q8CJ61 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Cmtm4Q8CJ61 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Cmtm4Q8CJ61 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ 0
Cmtm4Q8CJ61 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC15.05■□□□□ -0
Cmtm4Q8CJ61 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Cmtm4Q8CJ61 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC15.05■□□□□ -0
Cmtm4Q8CJ61 Gm43017-201ENSMUST00000198296 752 ntBASIC15.05■□□□□ -0
Cmtm4Q8CJ61 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC15.05■□□□□ -0
Cmtm4Q8CJ61 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cmtm4Q8CJ61 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cmtm4Q8CJ61 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Cmtm4Q8CJ61 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cmtm4Q8CJ61 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Cmtm4Q8CJ61 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Cmtm4Q8CJ61 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Cmtm4Q8CJ61 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ -0
Cmtm4Q8CJ61 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC15.05■□□□□ -0
Cmtm4Q8CJ61 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cmtm4Q8CJ61 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC15.05■□□□□ -0
Cmtm4Q8CJ61 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Cmtm4Q8CJ61 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC15.04■□□□□ -0
Cmtm4Q8CJ61 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cmtm4Q8CJ61 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Cmtm4Q8CJ61 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Cmtm4Q8CJ61 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC15.04■□□□□ -0
Cmtm4Q8CJ61 AC154231.1-201ENSMUST00000220564 2175 ntBASIC15.04■□□□□ -0
Cmtm4Q8CJ61 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cmtm4Q8CJ61 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cmtm4Q8CJ61 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
Cmtm4Q8CJ61 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Cmtm4Q8CJ61 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cmtm4Q8CJ61 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cmtm4Q8CJ61 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cmtm4Q8CJ61 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cmtm4Q8CJ61 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cmtm4Q8CJ61 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cmtm4Q8CJ61 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC15.04■□□□□ -0
Cmtm4Q8CJ61 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC15.04■□□□□ -0
Cmtm4Q8CJ61 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC15.04■□□□□ -0
Cmtm4Q8CJ61 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC15.04■□□□□ -0
Cmtm4Q8CJ61 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cmtm4Q8CJ61 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC15.04■□□□□ -0
Cmtm4Q8CJ61 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Cmtm4Q8CJ61 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC15.04■□□□□ -0
Cmtm4Q8CJ61 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC15.04■□□□□ -0
Cmtm4Q8CJ61 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cmtm4Q8CJ61 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Cmtm4Q8CJ61 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Cmtm4Q8CJ61 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC15.03■□□□□ -0
Cmtm4Q8CJ61 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cmtm4Q8CJ61 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Cmtm4Q8CJ61 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cmtm4Q8CJ61 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cmtm4Q8CJ61 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC15.03■□□□□ -0
Cmtm4Q8CJ61 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cmtm4Q8CJ61 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Cmtm4Q8CJ61 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cmtm4Q8CJ61 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Cmtm4Q8CJ61 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cmtm4Q8CJ61 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cmtm4Q8CJ61 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC15.03■□□□□ -0
Cmtm4Q8CJ61 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cmtm4Q8CJ61 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Cmtm4Q8CJ61 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cmtm4Q8CJ61 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Cmtm4Q8CJ61 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Cmtm4Q8CJ61 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cmtm4Q8CJ61 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Cmtm4Q8CJ61 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cmtm4Q8CJ61 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms