Protein–RNA interactions for Protein: Q8CJ40

Crocc, Rootletin, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CroccQ8CJ40 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CroccQ8CJ40 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CroccQ8CJ40 Gm43272-201ENSMUST00000200599 1584 ntBASIC16.65■□□□□ 0.26
CroccQ8CJ40 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC16.65■□□□□ 0.26
CroccQ8CJ40 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CroccQ8CJ40 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CroccQ8CJ40 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC16.65■□□□□ 0.26
CroccQ8CJ40 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
CroccQ8CJ40 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
CroccQ8CJ40 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC16.64■□□□□ 0.25
CroccQ8CJ40 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CroccQ8CJ40 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CroccQ8CJ40 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CroccQ8CJ40 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CroccQ8CJ40 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CroccQ8CJ40 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CroccQ8CJ40 Gm37025-201ENSMUST00000195159 829 ntBASIC16.64■□□□□ 0.25
CroccQ8CJ40 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CroccQ8CJ40 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CroccQ8CJ40 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CroccQ8CJ40 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CroccQ8CJ40 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CroccQ8CJ40 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CroccQ8CJ40 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CroccQ8CJ40 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC16.64■□□□□ 0.25
CroccQ8CJ40 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CroccQ8CJ40 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CroccQ8CJ40 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CroccQ8CJ40 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC16.63■□□□□ 0.25
CroccQ8CJ40 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC16.63■□□□□ 0.25
CroccQ8CJ40 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CroccQ8CJ40 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CroccQ8CJ40 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CroccQ8CJ40 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CroccQ8CJ40 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC16.63■□□□□ 0.25
CroccQ8CJ40 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CroccQ8CJ40 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CroccQ8CJ40 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
CroccQ8CJ40 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC16.63■□□□□ 0.25
CroccQ8CJ40 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CroccQ8CJ40 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CroccQ8CJ40 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC16.63■□□□□ 0.25
CroccQ8CJ40 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
CroccQ8CJ40 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CroccQ8CJ40 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CroccQ8CJ40 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CroccQ8CJ40 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CroccQ8CJ40 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CroccQ8CJ40 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CroccQ8CJ40 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC16.62■□□□□ 0.25
CroccQ8CJ40 AC175538.1-201ENSMUST00000225343 1269 ntBASIC16.62■□□□□ 0.25
CroccQ8CJ40 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC16.62■□□□□ 0.25
CroccQ8CJ40 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CroccQ8CJ40 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CroccQ8CJ40 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
CroccQ8CJ40 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CroccQ8CJ40 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CroccQ8CJ40 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CroccQ8CJ40 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC16.61■□□□□ 0.25
CroccQ8CJ40 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CroccQ8CJ40 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CroccQ8CJ40 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CroccQ8CJ40 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CroccQ8CJ40 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CroccQ8CJ40 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CroccQ8CJ40 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC16.61■□□□□ 0.25
CroccQ8CJ40 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CroccQ8CJ40 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC16.61■□□□□ 0.25
CroccQ8CJ40 AC166341.7-201ENSMUST00000221698 126 ntBASIC16.61■□□□□ 0.25
CroccQ8CJ40 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CroccQ8CJ40 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CroccQ8CJ40 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC16.61■□□□□ 0.25
CroccQ8CJ40 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CroccQ8CJ40 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CroccQ8CJ40 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CroccQ8CJ40 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CroccQ8CJ40 Dapk1-207ENSMUST00000226059 5009 ntBASIC16.61■□□□□ 0.25
CroccQ8CJ40 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CroccQ8CJ40 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CroccQ8CJ40 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC16.6■□□□□ 0.25
CroccQ8CJ40 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC16.6■□□□□ 0.25
CroccQ8CJ40 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CroccQ8CJ40 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CroccQ8CJ40 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
CroccQ8CJ40 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CroccQ8CJ40 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC16.6■□□□□ 0.25
CroccQ8CJ40 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CroccQ8CJ40 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CroccQ8CJ40 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CroccQ8CJ40 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CroccQ8CJ40 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC16.6■□□□□ 0.25
CroccQ8CJ40 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CroccQ8CJ40 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CroccQ8CJ40 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CroccQ8CJ40 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CroccQ8CJ40 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CroccQ8CJ40 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CroccQ8CJ40 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.6■□□□□ 0.25
CroccQ8CJ40 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CroccQ8CJ40 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms