Protein–RNA interactions for Protein: Q8CI71

Vps50, Syndetin, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps50Q8CI71 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vps50Q8CI71 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vps50Q8CI71 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vps50Q8CI71 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vps50Q8CI71 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vps50Q8CI71 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vps50Q8CI71 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vps50Q8CI71 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vps50Q8CI71 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vps50Q8CI71 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vps50Q8CI71 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vps50Q8CI71 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Vps50Q8CI71 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Vps50Q8CI71 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC17.11■□□□□ 0.33
Vps50Q8CI71 Gm18666-201ENSMUST00000190039 958 ntBASIC17.11■□□□□ 0.33
Vps50Q8CI71 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vps50Q8CI71 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC17.11■□□□□ 0.33
Vps50Q8CI71 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.11■□□□□ 0.33
Vps50Q8CI71 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vps50Q8CI71 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Vps50Q8CI71 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Vps50Q8CI71 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Vps50Q8CI71 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vps50Q8CI71 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vps50Q8CI71 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Vps50Q8CI71 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Vps50Q8CI71 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC17.1■□□□□ 0.33
Vps50Q8CI71 Gm21596-201ENSMUST00000178049 1316 ntBASIC17.1■□□□□ 0.33
Vps50Q8CI71 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vps50Q8CI71 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
Vps50Q8CI71 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Vps50Q8CI71 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.1■□□□□ 0.33
Vps50Q8CI71 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vps50Q8CI71 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vps50Q8CI71 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vps50Q8CI71 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vps50Q8CI71 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Vps50Q8CI71 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vps50Q8CI71 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Vps50Q8CI71 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vps50Q8CI71 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vps50Q8CI71 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vps50Q8CI71 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vps50Q8CI71 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC17.09■□□□□ 0.33
Vps50Q8CI71 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC17.09■□□□□ 0.33
Vps50Q8CI71 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC17.09■□□□□ 0.33
Vps50Q8CI71 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC17.09■□□□□ 0.33
Vps50Q8CI71 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vps50Q8CI71 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vps50Q8CI71 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC17.09■□□□□ 0.33
Vps50Q8CI71 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Vps50Q8CI71 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Vps50Q8CI71 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vps50Q8CI71 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vps50Q8CI71 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vps50Q8CI71 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vps50Q8CI71 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vps50Q8CI71 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vps50Q8CI71 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Vps50Q8CI71 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Vps50Q8CI71 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Vps50Q8CI71 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.08■□□□□ 0.33
Vps50Q8CI71 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Vps50Q8CI71 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Vps50Q8CI71 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.08■□□□□ 0.32
Vps50Q8CI71 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
Vps50Q8CI71 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Vps50Q8CI71 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Vps50Q8CI71 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Vps50Q8CI71 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Vps50Q8CI71 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Vps50Q8CI71 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Vps50Q8CI71 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Vps50Q8CI71 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Vps50Q8CI71 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Vps50Q8CI71 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
Vps50Q8CI71 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vps50Q8CI71 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Vps50Q8CI71 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vps50Q8CI71 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Vps50Q8CI71 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vps50Q8CI71 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.07■□□□□ 0.32
Vps50Q8CI71 Dio3-201ENSMUST00000097228 1449 ntBASIC17.07■□□□□ 0.32
Vps50Q8CI71 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vps50Q8CI71 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Vps50Q8CI71 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vps50Q8CI71 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vps50Q8CI71 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC17.07■□□□□ 0.32
Vps50Q8CI71 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
Vps50Q8CI71 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC17.07■□□□□ 0.32
Vps50Q8CI71 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC17.07■□□□□ 0.32
Vps50Q8CI71 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vps50Q8CI71 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vps50Q8CI71 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.07■□□□□ 0.32
Vps50Q8CI71 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC17.07■□□□□ 0.32
Vps50Q8CI71 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vps50Q8CI71 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Vps50Q8CI71 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vps50Q8CI71 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vps50Q8CI71 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms