Protein–RNA interactions for Protein: Q8CH19

Csnka2ip, Casein kinase II subunit alpha'-interacting protein, mousemouse

Predictions only

Length 720 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Csnka2ipQ8CH19 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Csnka2ipQ8CH19 Gm13401-201ENSMUST00000117074 291 ntBASIC16.46■□□□□ 0.23
Csnka2ipQ8CH19 Gm12085-201ENSMUST00000119263 940 ntBASIC16.46■□□□□ 0.23
Csnka2ipQ8CH19 Gm13836-201ENSMUST00000121159 501 ntBASIC16.46■□□□□ 0.23
Csnka2ipQ8CH19 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Csnka2ipQ8CH19 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Csnka2ipQ8CH19 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC16.46■□□□□ 0.23
Csnka2ipQ8CH19 Gm30025-201ENSMUST00000218555 728 ntBASIC16.46■□□□□ 0.23
Csnka2ipQ8CH19 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Csnka2ipQ8CH19 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Csnka2ipQ8CH19 Gm9987-201ENSMUST00000069768 567 ntBASIC16.46■□□□□ 0.23
Csnka2ipQ8CH19 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Csnka2ipQ8CH19 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
Csnka2ipQ8CH19 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Csnka2ipQ8CH19 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC16.46■□□□□ 0.23
Csnka2ipQ8CH19 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Csnka2ipQ8CH19 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Csnka2ipQ8CH19 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Csnka2ipQ8CH19 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Csnka2ipQ8CH19 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Csnka2ipQ8CH19 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Csnka2ipQ8CH19 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Csnka2ipQ8CH19 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Csnka2ipQ8CH19 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Csnka2ipQ8CH19 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Csnka2ipQ8CH19 Gm37374-201ENSMUST00000194954 1829 ntBASIC16.45■□□□□ 0.22
Csnka2ipQ8CH19 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
Csnka2ipQ8CH19 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Csnka2ipQ8CH19 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Csnka2ipQ8CH19 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Csnka2ipQ8CH19 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Csnka2ipQ8CH19 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC16.45■□□□□ 0.22
Csnka2ipQ8CH19 Gm11643-201ENSMUST00000119578 864 ntBASIC16.45■□□□□ 0.22
Csnka2ipQ8CH19 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Csnka2ipQ8CH19 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Csnka2ipQ8CH19 Gm8969-201ENSMUST00000199694 526 ntBASIC16.45■□□□□ 0.22
Csnka2ipQ8CH19 Odf3b-204ENSMUST00000227834 930 ntBASIC16.45■□□□□ 0.22
Csnka2ipQ8CH19 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Csnka2ipQ8CH19 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Csnka2ipQ8CH19 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Csnka2ipQ8CH19 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Csnka2ipQ8CH19 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Csnka2ipQ8CH19 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Csnka2ipQ8CH19 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Csnka2ipQ8CH19 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Csnka2ipQ8CH19 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Csnka2ipQ8CH19 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
Csnka2ipQ8CH19 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC16.44■□□□□ 0.22
Csnka2ipQ8CH19 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Csnka2ipQ8CH19 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Csnka2ipQ8CH19 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Csnka2ipQ8CH19 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
Csnka2ipQ8CH19 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Csnka2ipQ8CH19 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Csnka2ipQ8CH19 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Csnka2ipQ8CH19 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Csnka2ipQ8CH19 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Csnka2ipQ8CH19 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Csnka2ipQ8CH19 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Csnka2ipQ8CH19 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Csnka2ipQ8CH19 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Csnka2ipQ8CH19 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Csnka2ipQ8CH19 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Csnka2ipQ8CH19 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Csnka2ipQ8CH19 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Csnka2ipQ8CH19 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Csnka2ipQ8CH19 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Csnka2ipQ8CH19 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC16.43■□□□□ 0.22
Csnka2ipQ8CH19 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Csnka2ipQ8CH19 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Csnka2ipQ8CH19 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Csnka2ipQ8CH19 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Csnka2ipQ8CH19 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Csnka2ipQ8CH19 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Csnka2ipQ8CH19 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC16.43■□□□□ 0.22
Csnka2ipQ8CH19 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Csnka2ipQ8CH19 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Csnka2ipQ8CH19 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Csnka2ipQ8CH19 Gm37811-201ENSMUST00000192416 2601 ntBASIC16.43■□□□□ 0.22
Csnka2ipQ8CH19 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Csnka2ipQ8CH19 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Csnka2ipQ8CH19 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Csnka2ipQ8CH19 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Csnka2ipQ8CH19 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Csnka2ipQ8CH19 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Csnka2ipQ8CH19 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Csnka2ipQ8CH19 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Csnka2ipQ8CH19 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Csnka2ipQ8CH19 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Csnka2ipQ8CH19 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Csnka2ipQ8CH19 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Csnka2ipQ8CH19 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC16.42■□□□□ 0.22
Csnka2ipQ8CH19 Gm11539-201ENSMUST00000119837 557 ntBASIC16.42■□□□□ 0.22
Csnka2ipQ8CH19 Gm13436-201ENSMUST00000120418 567 ntBASIC16.42■□□□□ 0.22
Csnka2ipQ8CH19 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC16.42■□□□□ 0.22
Csnka2ipQ8CH19 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC16.42■□□□□ 0.22
Csnka2ipQ8CH19 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Csnka2ipQ8CH19 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Csnka2ipQ8CH19 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Csnka2ipQ8CH19 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms