Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sox30Q8CGW4 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sox30Q8CGW4 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Sox30Q8CGW4 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Sox30Q8CGW4 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Sox30Q8CGW4 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sox30Q8CGW4 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Sox30Q8CGW4 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sox30Q8CGW4 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sox30Q8CGW4 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
Sox30Q8CGW4 Gm20628-201ENSMUST00000177363 3215 ntBASIC19.07■□□□□ 0.64
Sox30Q8CGW4 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sox30Q8CGW4 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sox30Q8CGW4 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Sox30Q8CGW4 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sox30Q8CGW4 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sox30Q8CGW4 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
Sox30Q8CGW4 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sox30Q8CGW4 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sox30Q8CGW4 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sox30Q8CGW4 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sox30Q8CGW4 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sox30Q8CGW4 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sox30Q8CGW4 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sox30Q8CGW4 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Sox30Q8CGW4 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC19.06■□□□□ 0.64
Sox30Q8CGW4 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sox30Q8CGW4 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Sox30Q8CGW4 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sox30Q8CGW4 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Sox30Q8CGW4 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sox30Q8CGW4 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sox30Q8CGW4 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sox30Q8CGW4 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sox30Q8CGW4 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sox30Q8CGW4 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Sox30Q8CGW4 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sox30Q8CGW4 Gm6576-201ENSMUST00000169678 883 ntBASIC19.05■□□□□ 0.64
Sox30Q8CGW4 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC19.05■□□□□ 0.64
Sox30Q8CGW4 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sox30Q8CGW4 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Sox30Q8CGW4 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sox30Q8CGW4 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Sox30Q8CGW4 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sox30Q8CGW4 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sox30Q8CGW4 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sox30Q8CGW4 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sox30Q8CGW4 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sox30Q8CGW4 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sox30Q8CGW4 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sox30Q8CGW4 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sox30Q8CGW4 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC19.04■□□□□ 0.64
Sox30Q8CGW4 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sox30Q8CGW4 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC19.04■□□□□ 0.64
Sox30Q8CGW4 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Sox30Q8CGW4 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sox30Q8CGW4 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sox30Q8CGW4 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Sox30Q8CGW4 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sox30Q8CGW4 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sox30Q8CGW4 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sox30Q8CGW4 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Sox30Q8CGW4 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Sox30Q8CGW4 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Sox30Q8CGW4 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sox30Q8CGW4 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Sox30Q8CGW4 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sox30Q8CGW4 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sox30Q8CGW4 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sox30Q8CGW4 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC19.03■□□□□ 0.64
Sox30Q8CGW4 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC19.03■□□□□ 0.64
Sox30Q8CGW4 Gm15375-201ENSMUST00000119510 849 ntBASIC19.03■□□□□ 0.64
Sox30Q8CGW4 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC19.03■□□□□ 0.64
Sox30Q8CGW4 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sox30Q8CGW4 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Sox30Q8CGW4 AC122769.4-201ENSMUST00000228166 901 ntBASIC19.03■□□□□ 0.64
Sox30Q8CGW4 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Sox30Q8CGW4 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Sox30Q8CGW4 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Sox30Q8CGW4 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sox30Q8CGW4 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sox30Q8CGW4 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sox30Q8CGW4 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Sox30Q8CGW4 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sox30Q8CGW4 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sox30Q8CGW4 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sox30Q8CGW4 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC19.02■□□□□ 0.64
Sox30Q8CGW4 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sox30Q8CGW4 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sox30Q8CGW4 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sox30Q8CGW4 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sox30Q8CGW4 Gm36858-201ENSMUST00000194501 2391 ntBASIC19.02■□□□□ 0.64
Sox30Q8CGW4 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sox30Q8CGW4 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sox30Q8CGW4 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sox30Q8CGW4 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC19.02■□□□□ 0.64
Sox30Q8CGW4 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC19.02■□□□□ 0.64
Sox30Q8CGW4 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Sox30Q8CGW4 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC19.02■□□□□ 0.64
Sox30Q8CGW4 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC19.02■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms