Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc38Q8CDN8 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc38Q8CDN8 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc38Q8CDN8 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc38Q8CDN8 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Ccdc38Q8CDN8 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc38Q8CDN8 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc38Q8CDN8 Gm43338-201ENSMUST00000198617 2223 ntBASIC19.36■□□□□ 0.69
Ccdc38Q8CDN8 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc38Q8CDN8 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc38Q8CDN8 Gm45560-201ENSMUST00000211492 1472 ntBASIC19.36■□□□□ 0.69
Ccdc38Q8CDN8 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Ccdc38Q8CDN8 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Ccdc38Q8CDN8 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc38Q8CDN8 Gm43294-201ENSMUST00000202850 2490 ntBASIC19.36■□□□□ 0.69
Ccdc38Q8CDN8 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc38Q8CDN8 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc38Q8CDN8 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc38Q8CDN8 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc38Q8CDN8 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc38Q8CDN8 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc38Q8CDN8 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc38Q8CDN8 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc38Q8CDN8 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Ccdc38Q8CDN8 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc38Q8CDN8 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc38Q8CDN8 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc38Q8CDN8 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc38Q8CDN8 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Ccdc38Q8CDN8 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc38Q8CDN8 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC19.35■□□□□ 0.69
Ccdc38Q8CDN8 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc38Q8CDN8 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc38Q8CDN8 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc38Q8CDN8 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc38Q8CDN8 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC19.35■□□□□ 0.69
Ccdc38Q8CDN8 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC19.35■□□□□ 0.69
Ccdc38Q8CDN8 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Ccdc38Q8CDN8 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc38Q8CDN8 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc38Q8CDN8 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC19.34■□□□□ 0.69
Ccdc38Q8CDN8 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc38Q8CDN8 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc38Q8CDN8 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Ccdc38Q8CDN8 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc38Q8CDN8 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Ccdc38Q8CDN8 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc38Q8CDN8 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Ccdc38Q8CDN8 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc38Q8CDN8 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc38Q8CDN8 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ccdc38Q8CDN8 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC19.33■□□□□ 0.69
Ccdc38Q8CDN8 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ccdc38Q8CDN8 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Ccdc38Q8CDN8 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ccdc38Q8CDN8 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ccdc38Q8CDN8 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Ccdc38Q8CDN8 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC19.33■□□□□ 0.69
Ccdc38Q8CDN8 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Ccdc38Q8CDN8 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC19.33■□□□□ 0.68
Ccdc38Q8CDN8 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ccdc38Q8CDN8 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ccdc38Q8CDN8 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ccdc38Q8CDN8 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ccdc38Q8CDN8 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ccdc38Q8CDN8 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ccdc38Q8CDN8 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ccdc38Q8CDN8 Shroom3-211ENSMUST00000225438 5742 ntBASIC19.32■□□□□ 0.68
Ccdc38Q8CDN8 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Ccdc38Q8CDN8 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc38Q8CDN8 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc38Q8CDN8 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc38Q8CDN8 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc38Q8CDN8 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC19.32■□□□□ 0.68
Ccdc38Q8CDN8 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Ccdc38Q8CDN8 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc38Q8CDN8 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc38Q8CDN8 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc38Q8CDN8 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc38Q8CDN8 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc38Q8CDN8 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC19.32■□□□□ 0.68
Ccdc38Q8CDN8 Slc35b2-207ENSMUST00000226086 850 ntBASIC19.32■□□□□ 0.68
Ccdc38Q8CDN8 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc38Q8CDN8 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Ccdc38Q8CDN8 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc38Q8CDN8 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc38Q8CDN8 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC19.31■□□□□ 0.68
Ccdc38Q8CDN8 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Ccdc38Q8CDN8 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC19.31■□□□□ 0.68
Ccdc38Q8CDN8 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC19.31■□□□□ 0.68
Ccdc38Q8CDN8 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc38Q8CDN8 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc38Q8CDN8 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
Ccdc38Q8CDN8 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc38Q8CDN8 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc38Q8CDN8 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc38Q8CDN8 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc38Q8CDN8 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc38Q8CDN8 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc38Q8CDN8 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 66.6 ms