Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Lysmd4Q8CC84 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Lysmd4Q8CC84 Gm20628-201ENSMUST00000177363 3215 ntBASIC15.65■□□□□ 0.1
Lysmd4Q8CC84 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lysmd4Q8CC84 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lysmd4Q8CC84 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lysmd4Q8CC84 AC108858.1-201ENSMUST00000228461 1498 ntBASIC15.65■□□□□ 0.1
Lysmd4Q8CC84 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lysmd4Q8CC84 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Lysmd4Q8CC84 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lysmd4Q8CC84 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lysmd4Q8CC84 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lysmd4Q8CC84 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lysmd4Q8CC84 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lysmd4Q8CC84 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lysmd4Q8CC84 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lysmd4Q8CC84 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lysmd4Q8CC84 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Lysmd4Q8CC84 AC140264.2-202ENSMUST00000218746 817 ntBASIC15.64■□□□□ 0.09
Lysmd4Q8CC84 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC15.64■□□□□ 0.09
Lysmd4Q8CC84 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lysmd4Q8CC84 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lysmd4Q8CC84 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lysmd4Q8CC84 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
Lysmd4Q8CC84 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lysmd4Q8CC84 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lysmd4Q8CC84 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lysmd4Q8CC84 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lysmd4Q8CC84 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lysmd4Q8CC84 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lysmd4Q8CC84 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC15.64■□□□□ 0.09
Lysmd4Q8CC84 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Lysmd4Q8CC84 Gm16499-203ENSMUST00000204633 2177 ntBASIC15.63■□□□□ 0.09
Lysmd4Q8CC84 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Lysmd4Q8CC84 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Lysmd4Q8CC84 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC15.63■□□□□ 0.09
Lysmd4Q8CC84 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Lysmd4Q8CC84 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Lysmd4Q8CC84 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Lysmd4Q8CC84 Gm10418-201ENSMUST00000100943 576 ntBASIC15.63■□□□□ 0.09
Lysmd4Q8CC84 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Lysmd4Q8CC84 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Lysmd4Q8CC84 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC15.63■□□□□ 0.09
Lysmd4Q8CC84 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC15.63■□□□□ 0.09
Lysmd4Q8CC84 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC15.63■□□□□ 0.09
Lysmd4Q8CC84 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Lysmd4Q8CC84 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Lysmd4Q8CC84 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Lysmd4Q8CC84 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Lysmd4Q8CC84 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Lysmd4Q8CC84 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Lysmd4Q8CC84 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Lysmd4Q8CC84 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Lysmd4Q8CC84 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
Lysmd4Q8CC84 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lysmd4Q8CC84 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lysmd4Q8CC84 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lysmd4Q8CC84 Gm37820-201ENSMUST00000194021 2147 ntBASIC15.62■□□□□ 0.09
Lysmd4Q8CC84 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lysmd4Q8CC84 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Lysmd4Q8CC84 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lysmd4Q8CC84 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Lysmd4Q8CC84 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lysmd4Q8CC84 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lysmd4Q8CC84 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lysmd4Q8CC84 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Lysmd4Q8CC84 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Lysmd4Q8CC84 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lysmd4Q8CC84 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lysmd4Q8CC84 Gm11620-201ENSMUST00000118770 1845 ntBASIC15.61■□□□□ 0.09
Lysmd4Q8CC84 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Lysmd4Q8CC84 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Lysmd4Q8CC84 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Lysmd4Q8CC84 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Lysmd4Q8CC84 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Lysmd4Q8CC84 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Lysmd4Q8CC84 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Lysmd4Q8CC84 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
Lysmd4Q8CC84 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC15.61■□□□□ 0.09
Lysmd4Q8CC84 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC15.61■□□□□ 0.09
Lysmd4Q8CC84 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Lysmd4Q8CC84 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Lysmd4Q8CC84 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Lysmd4Q8CC84 Gm26596-201ENSMUST00000180464 2655 ntBASIC15.61■□□□□ 0.09
Lysmd4Q8CC84 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Lysmd4Q8CC84 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Lysmd4Q8CC84 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Lysmd4Q8CC84 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Lysmd4Q8CC84 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Lysmd4Q8CC84 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Lysmd4Q8CC84 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Lysmd4Q8CC84 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Lysmd4Q8CC84 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC15.6■□□□□ 0.09
Lysmd4Q8CC84 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Lysmd4Q8CC84 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC15.6■□□□□ 0.09
Lysmd4Q8CC84 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Lysmd4Q8CC84 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Lysmd4Q8CC84 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Lysmd4Q8CC84 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Lysmd4Q8CC84 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms