Protein–RNA interactions for Protein: Q8C3X2

Ccdc90b, Coiled-coil domain-containing protein 90B, mitochondrial, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc90bQ8C3X2 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc90bQ8C3X2 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Ccdc90bQ8C3X2 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Ccdc90bQ8C3X2 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc90bQ8C3X2 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc90bQ8C3X2 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.93■□□□□ 0.3
Ccdc90bQ8C3X2 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC16.93■□□□□ 0.3
Ccdc90bQ8C3X2 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC16.93■□□□□ 0.3
Ccdc90bQ8C3X2 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc90bQ8C3X2 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc90bQ8C3X2 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc90bQ8C3X2 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC16.92■□□□□ 0.3
Ccdc90bQ8C3X2 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc90bQ8C3X2 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC16.92■□□□□ 0.3
Ccdc90bQ8C3X2 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc90bQ8C3X2 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc90bQ8C3X2 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc90bQ8C3X2 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc90bQ8C3X2 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc90bQ8C3X2 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Ccdc90bQ8C3X2 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Ccdc90bQ8C3X2 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Ccdc90bQ8C3X2 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc90bQ8C3X2 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC16.92■□□□□ 0.3
Ccdc90bQ8C3X2 Appbp2os-202ENSMUST00000206972 447 ntBASIC16.92■□□□□ 0.3
Ccdc90bQ8C3X2 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC16.92■□□□□ 0.3
Ccdc90bQ8C3X2 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc90bQ8C3X2 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc90bQ8C3X2 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Ccdc90bQ8C3X2 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc90bQ8C3X2 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC16.92■□□□□ 0.3
Ccdc90bQ8C3X2 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc90bQ8C3X2 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC16.92■□□□□ 0.3
Ccdc90bQ8C3X2 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc90bQ8C3X2 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc90bQ8C3X2 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc90bQ8C3X2 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc90bQ8C3X2 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc90bQ8C3X2 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc90bQ8C3X2 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc90bQ8C3X2 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc90bQ8C3X2 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc90bQ8C3X2 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc90bQ8C3X2 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc90bQ8C3X2 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC16.91■□□□□ 0.3
Ccdc90bQ8C3X2 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Ccdc90bQ8C3X2 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc90bQ8C3X2 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc90bQ8C3X2 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc90bQ8C3X2 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc90bQ8C3X2 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Ccdc90bQ8C3X2 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc90bQ8C3X2 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc90bQ8C3X2 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc90bQ8C3X2 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Ccdc90bQ8C3X2 Hivep3-201ENSMUST00000084306 2973 ntBASIC16.91■□□□□ 0.3
Ccdc90bQ8C3X2 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Ccdc90bQ8C3X2 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc90bQ8C3X2 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
Ccdc90bQ8C3X2 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc90bQ8C3X2 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc90bQ8C3X2 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc90bQ8C3X2 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.9■□□□□ 0.3
Ccdc90bQ8C3X2 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Ccdc90bQ8C3X2 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc90bQ8C3X2 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc90bQ8C3X2 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc90bQ8C3X2 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Ccdc90bQ8C3X2 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc90bQ8C3X2 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc90bQ8C3X2 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Ccdc90bQ8C3X2 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc90bQ8C3X2 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Ccdc90bQ8C3X2 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.9■□□□□ 0.3
Ccdc90bQ8C3X2 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc90bQ8C3X2 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc90bQ8C3X2 AC131586.2-201ENSMUST00000228370 1512 ntBASIC16.9■□□□□ 0.3
Ccdc90bQ8C3X2 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Ccdc90bQ8C3X2 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Ccdc90bQ8C3X2 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Ccdc90bQ8C3X2 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc90bQ8C3X2 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc90bQ8C3X2 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc90bQ8C3X2 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc90bQ8C3X2 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc90bQ8C3X2 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC16.89■□□□□ 0.29
Ccdc90bQ8C3X2 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc90bQ8C3X2 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Ccdc90bQ8C3X2 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Ccdc90bQ8C3X2 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc90bQ8C3X2 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc90bQ8C3X2 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Ccdc90bQ8C3X2 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc90bQ8C3X2 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc90bQ8C3X2 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ccdc90bQ8C3X2 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ccdc90bQ8C3X2 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ccdc90bQ8C3X2 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ccdc90bQ8C3X2 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Ccdc90bQ8C3X2 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms