Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ptcd1Q8C2E4 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ptcd1Q8C2E4 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ptcd1Q8C2E4 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ptcd1Q8C2E4 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
Ptcd1Q8C2E4 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ptcd1Q8C2E4 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.02
Ptcd1Q8C2E4 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ptcd1Q8C2E4 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
Ptcd1Q8C2E4 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ptcd1Q8C2E4 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC21.41■■□□□ 1.02
Ptcd1Q8C2E4 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ptcd1Q8C2E4 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ptcd1Q8C2E4 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ptcd1Q8C2E4 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Ptcd1Q8C2E4 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ptcd1Q8C2E4 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ptcd1Q8C2E4 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ptcd1Q8C2E4 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC21.41■■□□□ 1.02
Ptcd1Q8C2E4 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ptcd1Q8C2E4 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ptcd1Q8C2E4 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ptcd1Q8C2E4 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Ptcd1Q8C2E4 Dapk1-207ENSMUST00000226059 5009 ntBASIC21.4■■□□□ 1.02
Ptcd1Q8C2E4 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ptcd1Q8C2E4 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
Ptcd1Q8C2E4 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Ptcd1Q8C2E4 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Ptcd1Q8C2E4 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ptcd1Q8C2E4 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ptcd1Q8C2E4 Gm11355-201ENSMUST00000121120 306 ntBASIC21.4■■□□□ 1.02
Ptcd1Q8C2E4 Mir3081-201ENSMUST00000175305 84 ntBASIC21.4■■□□□ 1.02
Ptcd1Q8C2E4 Gm7213-201ENSMUST00000215977 950 ntBASIC21.4■■□□□ 1.02
Ptcd1Q8C2E4 Mzt1-203ENSMUST00000227948 952 ntBASIC21.4■■□□□ 1.02
Ptcd1Q8C2E4 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ptcd1Q8C2E4 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Ptcd1Q8C2E4 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ptcd1Q8C2E4 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Ptcd1Q8C2E4 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ptcd1Q8C2E4 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Ptcd1Q8C2E4 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Ptcd1Q8C2E4 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC21.39■■□□□ 1.02
Ptcd1Q8C2E4 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Ptcd1Q8C2E4 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.02
Ptcd1Q8C2E4 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Ptcd1Q8C2E4 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Ptcd1Q8C2E4 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ptcd1Q8C2E4 Gm24841-201ENSMUST00000158676 357 ntBASIC21.39■■□□□ 1.01
Ptcd1Q8C2E4 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ptcd1Q8C2E4 Gm5867-201ENSMUST00000063197 592 ntBASIC21.39■■□□□ 1.01
Ptcd1Q8C2E4 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ptcd1Q8C2E4 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ptcd1Q8C2E4 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC21.39■■□□□ 1.01
Ptcd1Q8C2E4 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ptcd1Q8C2E4 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Ptcd1Q8C2E4 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ptcd1Q8C2E4 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ptcd1Q8C2E4 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Ptcd1Q8C2E4 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ptcd1Q8C2E4 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Ptcd1Q8C2E4 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ptcd1Q8C2E4 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC21.38■■□□□ 1.01
Ptcd1Q8C2E4 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
Ptcd1Q8C2E4 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Ptcd1Q8C2E4 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ptcd1Q8C2E4 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ptcd1Q8C2E4 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Ptcd1Q8C2E4 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC21.38■■□□□ 1.01
Ptcd1Q8C2E4 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ptcd1Q8C2E4 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ptcd1Q8C2E4 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ptcd1Q8C2E4 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ptcd1Q8C2E4 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Ptcd1Q8C2E4 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ptcd1Q8C2E4 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ptcd1Q8C2E4 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ptcd1Q8C2E4 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC21.37■■□□□ 1.01
Ptcd1Q8C2E4 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC21.37■■□□□ 1.01
Ptcd1Q8C2E4 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ptcd1Q8C2E4 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ptcd1Q8C2E4 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Ptcd1Q8C2E4 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Ptcd1Q8C2E4 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
Ptcd1Q8C2E4 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ptcd1Q8C2E4 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ptcd1Q8C2E4 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Ptcd1Q8C2E4 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ptcd1Q8C2E4 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Ptcd1Q8C2E4 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ptcd1Q8C2E4 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ptcd1Q8C2E4 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ptcd1Q8C2E4 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ptcd1Q8C2E4 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ptcd1Q8C2E4 Gm24589-201ENSMUST00000116692 94 ntBASIC21.36■■□□□ 1.01
Ptcd1Q8C2E4 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Ptcd1Q8C2E4 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ptcd1Q8C2E4 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ptcd1Q8C2E4 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ptcd1Q8C2E4 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Ptcd1Q8C2E4 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms