Protein–RNA interactions for Protein: Q8BUV6

Lsm11, U7 snRNA-associated Sm-like protein LSm11, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm11Q8BUV6 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Lsm11Q8BUV6 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Lsm11Q8BUV6 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Lsm11Q8BUV6 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Lsm11Q8BUV6 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Lsm11Q8BUV6 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Lsm11Q8BUV6 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Lsm11Q8BUV6 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Lsm11Q8BUV6 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Lsm11Q8BUV6 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Lsm11Q8BUV6 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC14.83□□□□□ -0.04
Lsm11Q8BUV6 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Lsm11Q8BUV6 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Lsm11Q8BUV6 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC14.83□□□□□ -0.04
Lsm11Q8BUV6 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Lsm11Q8BUV6 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Lsm11Q8BUV6 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Lsm11Q8BUV6 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC14.83□□□□□ -0.04
Lsm11Q8BUV6 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC14.83□□□□□ -0.04
Lsm11Q8BUV6 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Lsm11Q8BUV6 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Lsm11Q8BUV6 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Lsm11Q8BUV6 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Lsm11Q8BUV6 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Lsm11Q8BUV6 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Lsm11Q8BUV6 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lsm11Q8BUV6 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC14.82□□□□□ -0.04
Lsm11Q8BUV6 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Lsm11Q8BUV6 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lsm11Q8BUV6 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Lsm11Q8BUV6 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lsm11Q8BUV6 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lsm11Q8BUV6 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lsm11Q8BUV6 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Lsm11Q8BUV6 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lsm11Q8BUV6 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lsm11Q8BUV6 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Lsm11Q8BUV6 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lsm11Q8BUV6 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lsm11Q8BUV6 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lsm11Q8BUV6 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lsm11Q8BUV6 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Lsm11Q8BUV6 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lsm11Q8BUV6 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Lsm11Q8BUV6 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC14.82□□□□□ -0.04
Lsm11Q8BUV6 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Lsm11Q8BUV6 Gm37820-201ENSMUST00000194021 2147 ntBASIC14.82□□□□□ -0.04
Lsm11Q8BUV6 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lsm11Q8BUV6 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC14.82□□□□□ -0.04
Lsm11Q8BUV6 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC14.82□□□□□ -0.04
Lsm11Q8BUV6 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lsm11Q8BUV6 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lsm11Q8BUV6 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lsm11Q8BUV6 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lsm11Q8BUV6 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC14.81□□□□□ -0.04
Lsm11Q8BUV6 Gm16401-202ENSMUST00000197463 2074 ntBASIC14.81□□□□□ -0.04
Lsm11Q8BUV6 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Lsm11Q8BUV6 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Lsm11Q8BUV6 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Lsm11Q8BUV6 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lsm11Q8BUV6 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lsm11Q8BUV6 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lsm11Q8BUV6 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
Lsm11Q8BUV6 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lsm11Q8BUV6 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lsm11Q8BUV6 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lsm11Q8BUV6 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lsm11Q8BUV6 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC14.81□□□□□ -0.04
Lsm11Q8BUV6 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lsm11Q8BUV6 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC14.81□□□□□ -0.04
Lsm11Q8BUV6 Gm26596-201ENSMUST00000180464 2655 ntBASIC14.81□□□□□ -0.04
Lsm11Q8BUV6 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC14.81□□□□□ -0.04
Lsm11Q8BUV6 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lsm11Q8BUV6 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lsm11Q8BUV6 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lsm11Q8BUV6 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Lsm11Q8BUV6 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lsm11Q8BUV6 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lsm11Q8BUV6 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lsm11Q8BUV6 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lsm11Q8BUV6 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Lsm11Q8BUV6 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Lsm11Q8BUV6 Gm42778-201ENSMUST00000199644 553 ntBASIC14.8□□□□□ -0.04
Lsm11Q8BUV6 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lsm11Q8BUV6 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lsm11Q8BUV6 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lsm11Q8BUV6 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lsm11Q8BUV6 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lsm11Q8BUV6 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lsm11Q8BUV6 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC14.8□□□□□ -0.04
Lsm11Q8BUV6 Gm16499-203ENSMUST00000204633 2177 ntBASIC14.8□□□□□ -0.04
Lsm11Q8BUV6 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lsm11Q8BUV6 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Lsm11Q8BUV6 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lsm11Q8BUV6 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lsm11Q8BUV6 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lsm11Q8BUV6 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lsm11Q8BUV6 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Lsm11Q8BUV6 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Lsm11Q8BUV6 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms