Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC17.84■□□□□ 0.45
Nup54Q8BTS4 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nup54Q8BTS4 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.84■□□□□ 0.45
Nup54Q8BTS4 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nup54Q8BTS4 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.84■□□□□ 0.45
Nup54Q8BTS4 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Nup54Q8BTS4 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Nup54Q8BTS4 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
Nup54Q8BTS4 Rarb-207ENSMUST00000225921 2756 ntBASIC17.84■□□□□ 0.45
Nup54Q8BTS4 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.84■□□□□ 0.45
Nup54Q8BTS4 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nup54Q8BTS4 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.83■□□□□ 0.45
Nup54Q8BTS4 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Nup54Q8BTS4 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Nup54Q8BTS4 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
Nup54Q8BTS4 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.83■□□□□ 0.45
Nup54Q8BTS4 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Nup54Q8BTS4 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Nup54Q8BTS4 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.83■□□□□ 0.45
Nup54Q8BTS4 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nup54Q8BTS4 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.83■□□□□ 0.44
Nup54Q8BTS4 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC17.83■□□□□ 0.44
Nup54Q8BTS4 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Nup54Q8BTS4 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Nup54Q8BTS4 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nup54Q8BTS4 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Nup54Q8BTS4 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.83■□□□□ 0.44
Nup54Q8BTS4 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.83■□□□□ 0.44
Nup54Q8BTS4 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nup54Q8BTS4 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nup54Q8BTS4 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nup54Q8BTS4 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Nup54Q8BTS4 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Nup54Q8BTS4 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Nup54Q8BTS4 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Nup54Q8BTS4 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Nup54Q8BTS4 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
Nup54Q8BTS4 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nup54Q8BTS4 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
Nup54Q8BTS4 Gm37025-201ENSMUST00000195159 829 ntBASIC17.82■□□□□ 0.44
Nup54Q8BTS4 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.82■□□□□ 0.44
Nup54Q8BTS4 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nup54Q8BTS4 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.82■□□□□ 0.44
Nup54Q8BTS4 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nup54Q8BTS4 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.82■□□□□ 0.44
Nup54Q8BTS4 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Nup54Q8BTS4 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Nup54Q8BTS4 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nup54Q8BTS4 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nup54Q8BTS4 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Nup54Q8BTS4 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC17.81■□□□□ 0.44
Nup54Q8BTS4 Gm11539-201ENSMUST00000119837 557 ntBASIC17.81■□□□□ 0.44
Nup54Q8BTS4 Gm13436-201ENSMUST00000120418 567 ntBASIC17.81■□□□□ 0.44
Nup54Q8BTS4 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Nup54Q8BTS4 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Nup54Q8BTS4 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC17.81■□□□□ 0.44
Nup54Q8BTS4 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nup54Q8BTS4 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Nup54Q8BTS4 Krtap5-1-202ENSMUST00000188274 742 ntBASIC17.81■□□□□ 0.44
Nup54Q8BTS4 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC17.81■□□□□ 0.44
Nup54Q8BTS4 Gm43799-201ENSMUST00000201845 579 ntBASIC17.81■□□□□ 0.44
Nup54Q8BTS4 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nup54Q8BTS4 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Nup54Q8BTS4 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Nup54Q8BTS4 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nup54Q8BTS4 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nup54Q8BTS4 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nup54Q8BTS4 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Nup54Q8BTS4 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Nup54Q8BTS4 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nup54Q8BTS4 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nup54Q8BTS4 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Nup54Q8BTS4 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.8■□□□□ 0.44
Nup54Q8BTS4 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Nup54Q8BTS4 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Nup54Q8BTS4 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nup54Q8BTS4 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nup54Q8BTS4 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nup54Q8BTS4 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nup54Q8BTS4 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Nup54Q8BTS4 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nup54Q8BTS4 Gm13559-201ENSMUST00000120476 863 ntBASIC17.8■□□□□ 0.44
Nup54Q8BTS4 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Nup54Q8BTS4 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Nup54Q8BTS4 Gm27463-201ENSMUST00000183569 57 ntBASIC17.8■□□□□ 0.44
Nup54Q8BTS4 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Nup54Q8BTS4 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC17.8■□□□□ 0.44
Nup54Q8BTS4 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nup54Q8BTS4 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nup54Q8BTS4 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nup54Q8BTS4 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Nup54Q8BTS4 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Nup54Q8BTS4 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nup54Q8BTS4 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nup54Q8BTS4 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nup54Q8BTS4 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nup54Q8BTS4 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Nup54Q8BTS4 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Nup54Q8BTS4 Gm43353-201ENSMUST00000199224 1295 ntBASIC17.79■□□□□ 0.44
Nup54Q8BTS4 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms