Protein–RNA interactions for Protein: Q8BRJ4

Ppp1r3e, Protein phosphatase 1 regulatory subunit 3E, mousemouse

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp1r3eQ8BRJ4 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Ppp1r3eQ8BRJ4 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ppp1r3eQ8BRJ4 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ppp1r3eQ8BRJ4 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ppp1r3eQ8BRJ4 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ppp1r3eQ8BRJ4 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Ppp1r3eQ8BRJ4 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ppp1r3eQ8BRJ4 Gm10418-201ENSMUST00000100943 576 ntBASIC16.31■□□□□ 0.2
Ppp1r3eQ8BRJ4 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC16.31■□□□□ 0.2
Ppp1r3eQ8BRJ4 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC16.31■□□□□ 0.2
Ppp1r3eQ8BRJ4 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ppp1r3eQ8BRJ4 Zfp783-201ENSMUST00000095946 670 ntBASIC16.31■□□□□ 0.2
Ppp1r3eQ8BRJ4 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ppp1r3eQ8BRJ4 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ppp1r3eQ8BRJ4 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ppp1r3eQ8BRJ4 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ppp1r3eQ8BRJ4 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Ppp1r3eQ8BRJ4 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ppp1r3eQ8BRJ4 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ppp1r3eQ8BRJ4 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ppp1r3eQ8BRJ4 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ppp1r3eQ8BRJ4 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ppp1r3eQ8BRJ4 Hivep3-201ENSMUST00000084306 2973 ntBASIC16.3■□□□□ 0.2
Ppp1r3eQ8BRJ4 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ppp1r3eQ8BRJ4 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ppp1r3eQ8BRJ4 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ppp1r3eQ8BRJ4 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ppp1r3eQ8BRJ4 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC16.3■□□□□ 0.2
Ppp1r3eQ8BRJ4 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ppp1r3eQ8BRJ4 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ppp1r3eQ8BRJ4 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ppp1r3eQ8BRJ4 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Ppp1r3eQ8BRJ4 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ppp1r3eQ8BRJ4 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ppp1r3eQ8BRJ4 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ppp1r3eQ8BRJ4 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ppp1r3eQ8BRJ4 Mir2861-201ENSMUST00000175539 82 ntBASIC16.29■□□□□ 0.2
Ppp1r3eQ8BRJ4 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC16.29■□□□□ 0.2
Ppp1r3eQ8BRJ4 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Ppp1r3eQ8BRJ4 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
Ppp1r3eQ8BRJ4 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ppp1r3eQ8BRJ4 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ppp1r3eQ8BRJ4 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ppp1r3eQ8BRJ4 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ppp1r3eQ8BRJ4 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ppp1r3eQ8BRJ4 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ppp1r3eQ8BRJ4 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ppp1r3eQ8BRJ4 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ppp1r3eQ8BRJ4 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ppp1r3eQ8BRJ4 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC16.28■□□□□ 0.2
Ppp1r3eQ8BRJ4 Gm8839-201ENSMUST00000121279 1645 ntBASIC16.28■□□□□ 0.2
Ppp1r3eQ8BRJ4 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ppp1r3eQ8BRJ4 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Ppp1r3eQ8BRJ4 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
Ppp1r3eQ8BRJ4 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Ppp1r3eQ8BRJ4 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ppp1r3eQ8BRJ4 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Ppp1r3eQ8BRJ4 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ppp1r3eQ8BRJ4 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ppp1r3eQ8BRJ4 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ppp1r3eQ8BRJ4 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ppp1r3eQ8BRJ4 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ppp1r3eQ8BRJ4 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
Ppp1r3eQ8BRJ4 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ppp1r3eQ8BRJ4 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ppp1r3eQ8BRJ4 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ppp1r3eQ8BRJ4 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ppp1r3eQ8BRJ4 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ppp1r3eQ8BRJ4 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
Ppp1r3eQ8BRJ4 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ppp1r3eQ8BRJ4 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ppp1r3eQ8BRJ4 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ppp1r3eQ8BRJ4 Tfap2a-209ENSMUST00000225180 1828 ntBASIC16.27■□□□□ 0.2
Ppp1r3eQ8BRJ4 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ppp1r3eQ8BRJ4 Gm13401-201ENSMUST00000117074 291 ntBASIC16.27■□□□□ 0.2
Ppp1r3eQ8BRJ4 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC16.27■□□□□ 0.2
Ppp1r3eQ8BRJ4 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC16.27■□□□□ 0.2
Ppp1r3eQ8BRJ4 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ppp1r3eQ8BRJ4 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Ppp1r3eQ8BRJ4 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ppp1r3eQ8BRJ4 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ppp1r3eQ8BRJ4 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ppp1r3eQ8BRJ4 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ppp1r3eQ8BRJ4 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ppp1r3eQ8BRJ4 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ppp1r3eQ8BRJ4 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ppp1r3eQ8BRJ4 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ppp1r3eQ8BRJ4 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ppp1r3eQ8BRJ4 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ppp1r3eQ8BRJ4 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ppp1r3eQ8BRJ4 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Ppp1r3eQ8BRJ4 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ppp1r3eQ8BRJ4 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.26■□□□□ 0.19
Ppp1r3eQ8BRJ4 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ppp1r3eQ8BRJ4 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ppp1r3eQ8BRJ4 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ppp1r3eQ8BRJ4 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ppp1r3eQ8BRJ4 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ppp1r3eQ8BRJ4 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ppp1r3eQ8BRJ4 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms