Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rd3Q8BRE0 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Rd3Q8BRE0 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Rd3Q8BRE0 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rd3Q8BRE0 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rd3Q8BRE0 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rd3Q8BRE0 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Rd3Q8BRE0 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rd3Q8BRE0 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rd3Q8BRE0 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rd3Q8BRE0 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Rd3Q8BRE0 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rd3Q8BRE0 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC18.5■□□□□ 0.55
Rd3Q8BRE0 Gm13474-201ENSMUST00000122466 815 ntBASIC18.5■□□□□ 0.55
Rd3Q8BRE0 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC18.5■□□□□ 0.55
Rd3Q8BRE0 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Rd3Q8BRE0 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rd3Q8BRE0 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rd3Q8BRE0 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rd3Q8BRE0 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Rd3Q8BRE0 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Rd3Q8BRE0 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rd3Q8BRE0 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rd3Q8BRE0 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rd3Q8BRE0 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rd3Q8BRE0 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC18.49■□□□□ 0.55
Rd3Q8BRE0 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Rd3Q8BRE0 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.49■□□□□ 0.55
Rd3Q8BRE0 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC18.49■□□□□ 0.55
Rd3Q8BRE0 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rd3Q8BRE0 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rd3Q8BRE0 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC18.49■□□□□ 0.55
Rd3Q8BRE0 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rd3Q8BRE0 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rd3Q8BRE0 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC18.49■□□□□ 0.55
Rd3Q8BRE0 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Rd3Q8BRE0 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rd3Q8BRE0 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rd3Q8BRE0 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC18.49■□□□□ 0.55
Rd3Q8BRE0 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC18.49■□□□□ 0.55
Rd3Q8BRE0 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rd3Q8BRE0 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rd3Q8BRE0 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rd3Q8BRE0 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Rd3Q8BRE0 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Rd3Q8BRE0 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Rd3Q8BRE0 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rd3Q8BRE0 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rd3Q8BRE0 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Rd3Q8BRE0 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Rd3Q8BRE0 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rd3Q8BRE0 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Rd3Q8BRE0 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rd3Q8BRE0 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rd3Q8BRE0 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.49■□□□□ 0.55
Rd3Q8BRE0 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.48■□□□□ 0.55
Rd3Q8BRE0 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Rd3Q8BRE0 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rd3Q8BRE0 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC18.48■□□□□ 0.55
Rd3Q8BRE0 Gm25016-201ENSMUST00000158399 131 ntBASIC18.48■□□□□ 0.55
Rd3Q8BRE0 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC18.48■□□□□ 0.55
Rd3Q8BRE0 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
Rd3Q8BRE0 Gm7370-201ENSMUST00000219471 767 ntBASIC18.48■□□□□ 0.55
Rd3Q8BRE0 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rd3Q8BRE0 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Rd3Q8BRE0 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rd3Q8BRE0 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Rd3Q8BRE0 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rd3Q8BRE0 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rd3Q8BRE0 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rd3Q8BRE0 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rd3Q8BRE0 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.47■□□□□ 0.55
Rd3Q8BRE0 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rd3Q8BRE0 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rd3Q8BRE0 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rd3Q8BRE0 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Rd3Q8BRE0 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Rd3Q8BRE0 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Rd3Q8BRE0 Gm27389-201ENSMUST00000183622 195 ntBASIC18.47■□□□□ 0.55
Rd3Q8BRE0 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Rd3Q8BRE0 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rd3Q8BRE0 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rd3Q8BRE0 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rd3Q8BRE0 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rd3Q8BRE0 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rd3Q8BRE0 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC18.46■□□□□ 0.55
Rd3Q8BRE0 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rd3Q8BRE0 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Rd3Q8BRE0 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Rd3Q8BRE0 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rd3Q8BRE0 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rd3Q8BRE0 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rd3Q8BRE0 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Rd3Q8BRE0 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rd3Q8BRE0 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rd3Q8BRE0 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rd3Q8BRE0 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rd3Q8BRE0 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rd3Q8BRE0 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.45■□□□□ 0.54
Rd3Q8BRE0 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms